myRT

myRT report for GCA_002148015.1_ASM214801v1

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Seq: MOOM01000094.1 Bacillus thuringiensis serovar palmanyolensis strain BGSC 4BS1 contig000094, whole genome shotgun sequence (14698 bp)
Overview 1 RT 1: 9627-14240 bp Neighborhood of RT #1 [9627, 14593] KOG3544 BclA_C RVT_N RVT-GII GIIM Feature: gene Location: 9627-9923 bp Feature: gene Location: 10967-12010 bp Feature: domain Description: KOG3544 Location: 11000-11411 bp Feature: domain Description: KOG3544 Location: 1 1 000-1 1 41 1 bp Feature: domain Description: BclA_C Location: 11666-11963 bp Feature: domain Description: BclA_C Location: 1 1 666-1 1 963 bp Feature: gene Location: 12932-14593 bp Feature: RT Description: RVT_N Location: 12980-13226 bp Feature: RT Description: RVT_N Location: 1 2980-1 3226 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13280-13940 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 3280-1 3940 bp Feature: domain Description: GIIM Note: maturase Location: 14009-14240 bp Feature: domain Description: GIIM Note: maturase Location: 1 4009-1 4240 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT KOG3544 (KOG3544, Collagens (type IV and type XIII), and related proteins ), BclA_C (pfam18573), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: MOOM01000057.1 Bacillus thuringiensis serovar palmanyolensis strain BGSC 4BS1 contig000057, whole genome shotgun sequence (13594 bp)
Overview 1 RT 1: 5491-9740 bp Neighborhood of RT #1 [5491, 9740] RVT-GII Feature: gene Location: 5491-5682 bp Feature: gene Location: 5702-5887 bp Feature: gene Location: 5951-7755 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6248-6941 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 62 48-6941 bp Feature: gene Location: 8602-8910 bp Feature: gene Location: 9235-9740 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: MOOM01000121.1 Bacillus thuringiensis serovar palmanyolensis strain BGSC 4BS1 contig000121, whole genome shotgun sequence (2842 bp)
Overview 1 RT 1: 1-1912 bp Neighborhood of RT #1 [1, 2606] DDE_Tnp_1 RVT-GII Feature: gene Location: 1-789 bp Feature: domain Description: DDE_Tnp_1 Location: 97-784 bp Feature: domain Description: DDE_Tnp_1 Location: 97-784 bp Feature: gene Location: 950-1129 bp Feature: gene Location: 1303-2606 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1588-1912 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1588-1912 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, DDE_Tnp_1 (pfam01609)

Seq: MOOM01000083.1 Bacillus thuringiensis serovar palmanyolensis strain BGSC 4BS1 contig000083, whole genome shotgun sequence (35342 bp)
Overview 1 RT 1: 6119-11691 bp Neighborhood of RT #1 [6119, 11691] TraG_VirD4 TraG_VirD4 RVT-GII Intron_maturas2 HNHc TraG-D_C Feature: gene Location: 6119-6301 bp Feature: gene Location: 6326-7972 bp Feature: domain Description: TraG_VirD4 Location: 6794-7502 bp Feature: domain Description: TraG_VirD4 Location: 6794 -7502 bp Feature: domain Description: TraG_VirD4 Location: 7526-7922 bp Feature: domain Description: TraG_VirD4 Location: 7526-7922 bp Feature: gene Location: 8525-10348 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8798-9626 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8798-9626 bp Feature: domain Description: Intron_maturas2 Location: 9704-10043 bp Feature: domain Description: Intron_maturas2 Location: 9704 -1004 3 bp Feature: domain Description: HNHc Note: nucleases Location: 10145-10322 bp Feature: domain Description: HNHc Note: nucleases Location: 1014 5-10322 bp Feature: gene Location: 10453-11424 bp Feature: domain Description: TraG-D_C Location: 10456-10777 bp Feature: domain Description: TraG-D_C Location: 104 56-10777 bp Feature: gene Location: 11482-11691 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TraG-D_C (pfam12696), TraG_VirD4, RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: MOOM01000113.1 Bacillus thuringiensis serovar palmanyolensis strain BGSC 4BS1 contig000113, whole genome shotgun sequence (35560 bp)
Overview 1 RT 1: 106-2957 bp Neighborhood of RT #1 [106, 2959] RVT_N RVT-GII GIIM XRE Feature: gene Location: 106-1767 bp Feature: RT Description: RVT_N Location: 154-400 bp Feature: RT Description: RVT_N Location: 15 4-400 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 454-1114 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 45 4-1114 bp Feature: domain Description: GIIM Note: maturase Location: 1183-1414 bp Feature: domain Description: GIIM Note: maturase Location: 1183-1414 bp Feature: gene Location: 2409-2735 bp Feature: gene Location: 2762-2959 bp Feature: domain Description: XRE Location: 2774-2957 bp Feature: domain Description: XRE Location: 2774-295 7 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), XRE (COG1476)

Seq: MOOM01000062.1 Bacillus thuringiensis serovar palmanyolensis strain BGSC 4BS1 contig000062, whole genome shotgun sequence (12674 bp)
Overview 1 RT 1: 8191-11707 bp Neighborhood of RT #1 [8191, 12060] KOG3544 Collagen HTH_XRE RVT_N RVT-GII GIIM Feature: gene Location: 8191-8961 bp Feature: domain Description: KOG3544 Location: 8230-8635 bp Feature: domain Description: KOG3544 Location: 8230-86 35 bp Feature: domain Description: Collagen Location: 8788-8962 bp Feature: domain Description: Collagen Location: 8788-896 2 bp Feature: gene Location: 9681-10238 bp Feature: domain Description: HTH_XRE Location: 9693-9864 bp Feature: domain Description: HTH_XRE Location: 96 93-986 4 bp Feature: gene Location: 10399-12060 bp Feature: RT Description: RVT_N Location: 10447-10693 bp Feature: RT Description: RVT_N Location: 10447-106 93 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10747-11407 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10747-11407 bp Feature: domain Description: GIIM Note: maturase Location: 11476-11707 bp Feature: domain Description: GIIM Note: maturase Location: 11476 -11707 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), KOG3544 (KOG3544, Collagens (type IV and type XIII), and related proteins ), Collagen (pfam01391), HTH_XRE (smart00530)

Seq: MOOM01000008.1 Bacillus thuringiensis serovar palmanyolensis strain BGSC 4BS1 contig000008, whole genome shotgun sequence (3918 bp)
Overview 1 RT 1: 106-3285 bp Neighborhood of RT #1 [106, 3285] RVT_N RVT-GII GIIM Feature: gene Location: 106-1767 bp Feature: RT Description: RVT_N Location: 154-400 bp Feature: RT Description: RVT_N Location: 154-400 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 454-1114 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 454-1114 bp Feature: domain Description: GIIM Note: maturase Location: 1183-1414 bp Feature: domain Description: GIIM Note: maturase Location: 1183-1414 bp Feature: gene Location: 3016-3285 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: MOOM01000048.1 Bacillus thuringiensis serovar palmanyolensis strain BGSC 4BS1 contig000048, whole genome shotgun sequence (18760 bp)
Overview 1 RT 1: 15050-17793 bp Neighborhood of RT #1 [15050, 18146] RVT_N RVT-GII GIIM Feature: gene Location: 15050-15535 bp Feature: gene Location: 15594-16076 bp Feature: gene Location: 16485-18146 bp Feature: RT Description: RVT_N Location: 16533-16779 bp Feature: RT Description: RVT_N Location: 16533-16779 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16833-17493 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 168 33-17493 bp Feature: domain Description: GIIM Note: maturase Location: 17562-17793 bp Feature: domain Description: GIIM Note: maturase Location: 17562-17793 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: MOOM01000112.1 Bacillus thuringiensis serovar palmanyolensis strain BGSC 4BS1 contig000112, whole genome shotgun sequence (6141 bp)
Overview 1 RT 1: 615-4611 bp Neighborhood of RT #1 [615, 4631] RVT_N RVT-GII GIIM DDE_Tnp_1 GtrA Feature: gene Location: 615-2276 bp Feature: RT Description: RVT_N Location: 663-909 bp Feature: RT Description: RVT_N Location: 663-9 09 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 963-1623 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9 63-1623 bp Feature: domain Description: GIIM Note: maturase Location: 1692-1923 bp Feature: domain Description: GIIM Note: maturase Location: 169 2-19 23 bp Feature: gene Location: 2586-4021 bp Feature: domain Description: DDE_Tnp_1 Location: 2946-3108 bp Feature: domain Description: DDE_Tnp_1 Location: 29 46-3108 bp Feature: gene Location: 4242-4631 bp Feature: domain Description: GtrA Location: 4278-4611 bp Feature: domain Description: GtrA Location: 4278-4611 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_1 (pfam01609), GtrA (pfam04138), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: MOOM01000117.1 Bacillus thuringiensis serovar palmanyolensis strain BGSC 4BS1 contig000117, whole genome shotgun sequence (34320 bp)
Overview 1 RT 1: 23959-30802 bp Neighborhood of RT #1 [23959, 30802] CwlT_like RVT-GII HNHc CwlT_like Spr Feature: gene Location: 23959-26211 bp Feature: gene Location: 26239-26859 bp Feature: domain Description: CwlT_like Location: 26614-26860 bp Feature: domain Description: CwlT_like Location: 26614-26860 bp Feature: gene Location: 27649-29445 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 27907-28612 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 27907-28612 bp Feature: domain Description: HNHc Note: nucleases Location: 29176-29308 bp Feature: domain Description: HNHc Note: nucleases Location: 29176-29308 bp Feature: gene Location: 29493-30155 bp Feature: domain Description: CwlT_like Location: 29541-29730 bp Feature: domain Description: CwlT_like Location: 29541-29730 bp Feature: domain Description: Spr Location: 29769-30138 bp Feature: domain Description: Spr Location: 29769-30138 bp Feature: gene Location: 30206-30802 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CwlT_like, RVT-GII, HNHc (smart00507), Spr (COG0791)