myRT

myRT report for GCA_002148025.1_ASM214802v1

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Seq: MOOF01000161.1 [Bacillus thuringiensis] serovar konkukian strain BGSC 4AH1 contig000161, whole genome shotgun sequence (2383 bp)
Overview 1 RT 1: 615-1923 bp Neighborhood of RT #1 [615, 2276] RVT_N RVT-GII GIIM Feature: gene Location: 615-2276 bp Feature: RT Description: RVT_N Location: 663-909 bp Feature: RT Description: RVT_N Location: 663-909 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 963-1623 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 963-1 623 bp Feature: domain Description: GIIM Note: maturase Location: 1692-1923 bp Feature: domain Description: GIIM Note: maturase Location: 1 692-1 923 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: MOOF01000120.1 [Bacillus thuringiensis] serovar konkukian strain BGSC 4AH1 contig000120, whole genome shotgun sequence (7699 bp)
Overview 1 RT 1: 107-4583 bp Neighborhood of RT #1 [107, 4681] RVT-GII Intron_maturas2 HNHc cdc6 cdc6 Feature: gene Location: 107-1930 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 380-1208 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 380-12 08 bp Feature: domain Description: Intron_maturas2 Location: 1286-1601 bp Feature: domain Description: Intron_maturas2 Location: 12 86-1601 bp Feature: domain Description: HNHc Note: nucleases Location: 1727-1904 bp Feature: domain Description: HNHc Note: nucleases Location: 172 7-1904 bp Feature: gene Location: 2483-4128 bp Feature: gene Location: 4166-4681 bp Feature: domain Description: cdc6 Location: 4217-4289 bp Feature: domain Description: cdc6 Location: 42 17-42 89 bp Feature: domain Description: cdc6 Location: 4406-4583 bp Feature: domain Description: cdc6 Location: 4406-4583 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), cdc6

Seq: MOOF01000021.1 [Bacillus thuringiensis] serovar konkukian strain BGSC 4AH1 contig000021, whole genome shotgun sequence (35215 bp)
Overview 1 RT 1: 19247-24468 bp Neighborhood of RT #1 [19247, 24468] RVT-GII Feature: gene Location: 19247-19435 bp Feature: gene Location: 19536-20501 bp Feature: gene Location: 21010-22799 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21271-22072 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21271-22072 bp Feature: gene Location: 23705-23887 bp Feature: gene Location: 24271-24468 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: MOOF01000160.1 [Bacillus thuringiensis] serovar konkukian strain BGSC 4AH1 contig000160, whole genome shotgun sequence (8724 bp)
Overview 1 RT 1: 1-2633 bp Neighborhood of RT #1 [1, 2635] RVT_N RVT-GII PRK06752 DUF4318 Feature: gene Location: 1-999 bp Feature: RT Description: RVT_N Location: 49-295 bp Feature: RT Description: RVT_N Location: 4 9-295 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 349-1000 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 34 9-1000 bp Feature: gene Location: 1886-2221 bp Feature: domain Description: PRK06752 Location: 1889-2219 bp Feature: domain Description: PRK06752 Location: 1889-2219 bp Feature: gene Location: 2381-2635 bp Feature: domain Description: DUF4318 Location: 2426-2633 bp Feature: domain Description: DUF4 318 Location: 24 26-2633 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK06752 (single-stranded DNA-binding protein; Validated), RVT_N (pfam13655), RVT-GII, DUF4318 (pfam14201)

Seq: MOOF01000162.1 [Bacillus thuringiensis] serovar konkukian strain BGSC 4AH1 contig000162, whole genome shotgun sequence (2383 bp)
Overview 1 RT 1: 615-1923 bp Neighborhood of RT #1 [615, 2276] RVT_N RVT-GII GIIM Feature: gene Location: 615-2276 bp Feature: RT Description: RVT_N Location: 663-909 bp Feature: RT Description: RVT_N Location: 663-909 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 963-1623 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 963-1623 bp Feature: domain Description: GIIM Note: maturase Location: 1692-1923 bp Feature: domain Description: GIIM Note: maturase Location: 1692-1923 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: MOOF01000309.1 [Bacillus thuringiensis] serovar konkukian strain BGSC 4AH1 contig000309, whole genome shotgun sequence (36194 bp)
Overview 1 RT 1: 601-6493 bp Neighborhood of RT #1 [601, 6774] RVT-GII Intron_maturas2 HNHc TraG-D_C CcmA Feature: gene Location: 601-2424 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 874-1702 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 874-1702 bp Feature: domain Description: Intron_maturas2 Location: 1780-2095 bp Feature: domain Description: Intron_maturas2 Location: 1780-2095 bp Feature: domain Description: HNHc Note: nucleases Location: 2221-2398 bp Feature: domain Description: HNHc Note: nucleases Location: 2221-2398 bp Feature: gene Location: 2529-3368 bp Feature: domain Description: TraG-D_C Location: 2532-2847 bp Feature: domain Description: TraG-D_C Location: 2532-2847 bp Feature: gene Location: 3403-6774 bp Feature: domain Description: CcmA Location: 6169-6493 bp Feature: domain Description: CcmA Location: 6 16 9-6 493 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TraG-D_C (pfam12696), CcmA (COG4133), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: MOOF01000121.1 [Bacillus thuringiensis] serovar konkukian strain BGSC 4AH1 contig000121, whole genome shotgun sequence (8384 bp)
Overview 1 RT 1: 107-4464 bp Neighborhood of RT #1 [107, 4464] RVT-GII Intron_maturas2 HNHc TraG_VirD4 VirD4 Feature: gene Location: 107-1930 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 380-1208 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 380-1208 bp Feature: domain Description: Intron_maturas2 Location: 1286-1601 bp Feature: domain Description: Intron_maturas2 Location: 1286-1601 bp Feature: domain Description: HNHc Note: nucleases Location: 1727-1904 bp Feature: domain Description: HNHc Note: nucleases Location: 17 27 -1904 bp Feature: gene Location: 2483-4129 bp Feature: domain Description: TraG_VirD4 Location: 2951-3683 bp Feature: domain Description: TraG_VirD4 Location: 2951-3683 bp Feature: domain Description: VirD4 Location: 3920-4079 bp Feature: domain Description: VirD4 Location: 3920-407 9 bp Feature: gene Location: 4162-4464 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), TraG_VirD4, VirD4 (COG3505)

Seq: MOOF01000107.1 [Bacillus thuringiensis] serovar konkukian strain BGSC 4AH1 contig000107, whole genome shotgun sequence (37330 bp)
Overview 1 RT 1: 33577-36704 bp Neighborhood of RT #1 [33577, 36730] TraG-D_C RVT-GII Intron_maturas2 HNHc Feature: gene Location: 33577-33780 bp Feature: gene Location: 33777-34802 bp Feature: domain Description: TraG-D_C Location: 33780-34101 bp Feature: domain Description: TraG-D_C Location: 3378 0-34101 bp Feature: gene Location: 34907-36730 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 35180-36008 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3518 0-36008 bp Feature: domain Description: Intron_maturas2 Location: 36086-36401 bp Feature: domain Description: Intron_maturas2 Location: 3608 6-36401 bp Feature: domain Description: HNHc Note: nucleases Location: 36527-36704 bp Feature: domain Description: HNHc Note: nucleases Location: 36527-36704 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TraG-D_C (pfam12696), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: MOOF01000047.1 [Bacillus thuringiensis] serovar konkukian strain BGSC 4AH1 contig000047, whole genome shotgun sequence (48718 bp)
Overview 1 RT 1: 42392-48586 bp Neighborhood of RT #1 [42392, 48612] T4SS-DNA_transf T4SS-DNA_transf RVT-GII Intron_maturas2 HNHc Feature: gene Location: 42392-44377 bp Feature: gene Location: 44395-46248 bp Feature: domain Description: T4SS-DNA_transf Location: 44938-45634 bp Feature: domain Description: T4SS-DNA_transf Location: 449 38-45634 bp Feature: domain Description: T4SS-DNA_transf Location: 46024-46186 bp Feature: domain Description: T4SS-DNA_transf Location: 46024-46186 bp Feature: gene Location: 46789-48612 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 47062-47890 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 47062-4789 0 bp Feature: domain Description: Intron_maturas2 Location: 47968-48283 bp Feature: domain Description: Intron_maturas2 Location: 479 68-48283 bp Feature: domain Description: HNHc Note: nucleases Location: 48409-48586 bp Feature: domain Description: HNHc Note: nucleases Location: 48409 -48586 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT T4SS-DNA_transf (pfam02534), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: MOOF01000112.1 [Bacillus thuringiensis] serovar konkukian strain BGSC 4AH1 contig000112, whole genome shotgun sequence (13354 bp)
Overview 1 RT 1: 9249-13355 bp Neighborhood of RT #1 [9249, 13354] Rve NPP1 RicinB_lectin_2 RVT_N RVT-GII Feature: gene Location: 9249-9935 bp Feature: domain Description: Rve Location: 9255-9897 bp Feature: domain Description: Rve Location: 9255-9897 bp Feature: gene Location: 10402-11613 bp Feature: domain Description: NPP1 Location: 10552-11161 bp Feature: domain Description: NPP1 Location: 10 552-11161 bp Feature: domain Description: RicinB_lectin_2 Location: 11200-11416 bp Feature: domain Description: RicinB_lectin_2 Location: 11200-11416 bp Feature: gene Location: 12356-13354 bp Feature: RT Description: RVT_N Location: 12404-12650 bp Feature: RT Description: RVT_N Location: 12404-12650 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12704-13355 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12704-13355 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT NPP1 (pfam05630), RicinB_lectin_2 (pfam14200), RVT_N (pfam13655), RVT-GII, Rve (COG3316)

Seq: MOOF01000305.1 [Bacillus thuringiensis] serovar konkukian strain BGSC 4AH1 contig000305, whole genome shotgun sequence (50908 bp)
Overview 1 RT 1: 37064-43162 bp 2 RT 2: 47142-50282 bp Neighborhood of RT #1 [37064, 43257] Spr RVT-GII Intron_maturas2 HNHc Lysozyme_like TraC-F-type TraC-F-type Neighborhood of RT #2 [47142, 50308] TraG-D_C RVT-GII Intron_maturas2 HNHc Feature: gene Location: 37064-37642 bp Feature: gene Location: 37670-38146 bp Feature: domain Description: Spr Location: 37748-38129 bp Feature: domain Description: Spr Location: 37748-38129 bp Feature: gene Location: 38258-40081 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 38522-39353 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 38522-39353 bp Feature: domain Description: Intron_maturas2 Location: 39428-39731 bp Feature: domain Description: Intron_maturas2 Location: 39428-39731 bp Feature: domain Description: HNHc Note: nucleases Location: 39902-40055 bp Feature: domain Description: HNHc Note: nucleases Location: 39902-40055 bp Feature: gene Location: 40662-41315 bp Feature: domain Description: Lysozyme_like Location: 40851-41313 bp Feature: domain Description: Lysozyme_like Location: 40851-41313 bp Feature: gene Location: 41320-43257 bp Feature: domain Description: TraC-F-type Location: 42037-42280 bp Feature: domain Description: TraC-F-type Location: 42037-42280 bp Feature: domain Description: TraC-F-type Location: 42832-43162 bp Feature: domain Description: TraC-F-type Location: 42832-43162 bp Feature: gene Location: 47142-47351 bp Feature: gene Location: 47409-48380 bp Feature: domain Description: TraG-D_C Location: 47412-47733 bp Feature: domain Description: TraG-D_C Location: 47412-47733 bp Feature: gene Location: 48485-50308 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 48758-49586 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 48758-49586 bp Feature: domain Description: Intron_maturas2 Location: 49664-49979 bp Feature: domain Description: Intron_maturas2 Location: 49664-49979 bp Feature: domain Description: HNHc Note: nucleases Location: 50105-50282 bp Feature: domain Description: HNHc Note: nucleases Location: 50105-50282 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Spr (COG0791), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), Lysozyme_like (pfam13702), TraC-F-type (TIGR02746), TraG-D_C (pfam12696)