myRT

myRT report for GCA_002148065.1_ASM214806v1

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Seq: MOOR01000114.1 Bacillus thuringiensis serovar zhaodongensis strain BGSC 4BZ1 contig000114, whole genome shotgun sequence (21999 bp)
Overview 1 RT 1: 16745-21150 bp Neighborhood of RT #1 [16745, 21266] VirD4 RVT-GII HNHc Feature: gene Location: 16745-17566 bp Feature: gene Location: 17587-19254 bp Feature: domain Description: VirD4 Location: 17599-18598 bp Feature: domain Description: VirD4 Location: 1 7599-1 8598 bp Feature: gene Location: 19434-21266 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19734-20439 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 9734-20439 bp Feature: domain Description: HNHc Note: nucleases Location: 21018-21150 bp Feature: domain Description: HNHc Note: nucleases Location: 21 01 8-21 1 50 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT VirD4 (COG3505), RVT-GII, HNHc (smart00507)

Seq: MOOR01000055.1 Bacillus thuringiensis serovar zhaodongensis strain BGSC 4BZ1 contig000055, whole genome shotgun sequence (34584 bp)
Overview 1 RT 1: 116-3641 bp Neighborhood of RT #1 [116, 3641] RVT-GII HNHc PRK13880 Feature: gene Location: 116-1948 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 416-1121 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 416-112 1 bp Feature: domain Description: HNHc Note: nucleases Location: 1700-1832 bp Feature: domain Description: HNHc Note: nucleases Location: 1700-1832 bp Feature: gene Location: 2664-3269 bp Feature: domain Description: PRK13880 Location: 2757-3252 bp Feature: domain Description: PRK13880 Location: 2 757-32 52 bp Feature: gene Location: 3285-3641 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507), PRK13880 (conjugal transfer coupling protein TraG; Provisional)

Seq: MOOR01000056.1 Bacillus thuringiensis serovar zhaodongensis strain BGSC 4BZ1 contig000056, whole genome shotgun sequence (4324 bp)
Overview 1 RT 1: 116-4200 bp Neighborhood of RT #1 [116, 4199] RVT-GII HNHc AAA_10 Feature: gene Location: 116-1948 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 416-1121 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 416-1121 bp Feature: domain Description: HNHc Note: nucleases Location: 1700-1832 bp Feature: domain Description: HNHc Note: nucleases Location: 1700-183 2 bp Feature: gene Location: 2685-4199 bp Feature: domain Description: AAA_10 Location: 4026-4200 bp Feature: domain Description: AAA_10 Location: 4026-4200 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507), AAA_10 (pfam12846)

Seq: MOOR01000057.1 Bacillus thuringiensis serovar zhaodongensis strain BGSC 4BZ1 contig000057, whole genome shotgun sequence (77998 bp)
Overview 1 RT 1: 734-4186 bp Neighborhood of RT #1 [734, 4186] RVT-GII HNHc AAA_10 Feature: gene Location: 734-2566 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1034-1739 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1034 -1739 bp Feature: domain Description: HNHc Note: nucleases Location: 2318-2450 bp Feature: domain Description: HNHc Note: nucleases Location: 2318-24 50 bp Feature: gene Location: 2683-3702 bp Feature: domain Description: AAA_10 Location: 2689-3586 bp Feature: domain Description: AAA_10 Location: 2689-3586 bp Feature: gene Location: 3704-4186 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AAA_10 (pfam12846), RVT-GII, HNHc (smart00507)

Seq: MOOR01000080.1 Bacillus thuringiensis serovar zhaodongensis strain BGSC 4BZ1 contig000080, whole genome shotgun sequence (299899 bp)
Overview 1 RT 1: 295708-299668 bp Neighborhood of RT #1 [295708, 299784] caa3_CtaG amiF RVT-GII HNHc Feature: gene Location: 295708-296613 bp Feature: domain Description: caa3_CtaG Location: 295717-296557 bp Feature: domain Description: caa3_CtaG Location: 295 717-2965 5 7 bp Feature: gene Location: 296847-297218 bp Feature: domain Description: amiF Location: 296850-297219 bp Feature: domain Description: amiF Location: 29685 0-297219 bp Feature: gene Location: 297952-299784 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 298252-298957 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 29825 2-29895 7 bp Feature: domain Description: HNHc Note: nucleases Location: 299536-299668 bp Feature: domain Description: HNHc Note: nucleases Location: 2995 36-299668 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT caa3_CtaG (TIGR02737), amiF (PRK13287), RVT-GII, HNHc (smart00507)

Seq: MOOR01000086.1 Bacillus thuringiensis serovar zhaodongensis strain BGSC 4BZ1 contig000086, whole genome shotgun sequence (68216 bp)
Overview 1 RT 1: 11335-15384 bp Neighborhood of RT #1 [11335, 15404] YueH DNase_NucA_NucB RVT-GII Intron_maturas2 HNHc HTH_17 DUF3961 Feature: gene Location: 11335-11586 bp Feature: domain Description: YueH Location: 11383-11551 bp Feature: domain Description: YueH Location: 11383-11551 bp Feature: gene Location: 11609-11914 bp Feature: domain Description: DNase_NucA_NucB Location: 11753-11909 bp Feature: domain Description: DNase_NucA_NucB Location: 11753-11909 bp Feature: gene Location: 12511-14337 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12775-13618 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12775-136 18 bp Feature: domain Description: Intron_maturas2 Location: 13699-13987 bp Feature: domain Description: Intron_maturas2 Location: 136 99-13987 bp Feature: domain Description: HNHc Note: nucleases Location: 14167-14308 bp Feature: domain Description: HNHc Note: nucleases Location: 1416 7-14308 bp Feature: gene Location: 14838-15074 bp Feature: domain Description: HTH_17 Location: 14859-15066 bp Feature: domain Description: HTH_17 Location: 14859-1506 6 bp Feature: gene Location: 15165-15404 bp Feature: domain Description: DUF3961 Location: 15285-15384 bp Feature: domain Description: DUF396 1 Location: 15285-15384 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YueH (pfam14166), DNase_NucA_NucB (pfam14040), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), HTH_17 (pfam12728), DUF3961 (pfam13106)

Seq: MOOR01000064.1 Bacillus thuringiensis serovar zhaodongensis strain BGSC 4BZ1 contig000064, whole genome shotgun sequence (288126 bp)
Overview 1 RT 1: 284409-287277 bp Neighborhood of RT #1 [284409, 287393] YugN amiF RVT-GII HNHc Feature: gene Location: 284409-284774 bp Feature: domain Description: YugN Location: 284427-284688 bp Feature: domain Description: YugN Location: 284427 -284688 bp Feature: gene Location: 284821-285444 bp Feature: domain Description: amiF Location: 284824-285439 bp Feature: domain Description: amiF Location: 284824-285439 bp Feature: gene Location: 285561-287393 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 285861-286566 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 285861-286566 bp Feature: domain Description: HNHc Note: nucleases Location: 287145-287277 bp Feature: domain Description: HNHc Note: nucleases Location: 287 145-287 27 7 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YugN (pfam08868), amiF (PRK13287), RVT-GII, HNHc (smart00507)

Seq: MOOR01000090.1 Bacillus thuringiensis serovar zhaodongensis strain BGSC 4BZ1 contig000090, whole genome shotgun sequence (59113 bp)
Overview 1 RT 1: 55253-58882 bp Neighborhood of RT #1 [55253, 58998] RVT-GII HNHc Feature: gene Location: 55253-55795 bp Feature: gene Location: 55824-56432 bp Feature: gene Location: 57166-58998 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 57466-58171 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 57466-58 171 bp Feature: domain Description: HNHc Note: nucleases Location: 58750-58882 bp Feature: domain Description: HNHc Note: nucleases Location: 58 750-58 8 8 2 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507)

Seq: MOOR01000076.1 Bacillus thuringiensis serovar zhaodongensis strain BGSC 4BZ1 contig000076, whole genome shotgun sequence (13357 bp)
Overview 1 RT 1: 9166-12508 bp Neighborhood of RT #1 [9166, 12624] Maff2 Flg_new RVT-GII HNHc Feature: gene Location: 9166-9381 bp Feature: domain Description: Maff2 Location: 9169-9376 bp Feature: domain Description: Maff2 Location: 9 169 -9 376 bp Feature: gene Location: 9563-10675 bp Feature: domain Description: Flg_new Location: 9629-9812 bp Feature: domain Description: Flg_new Location: 9 629 -9 812 bp Feature: gene Location: 10792-12624 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11092-11797 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1109 2-1179 7 bp Feature: domain Description: HNHc Note: nucleases Location: 12376-12508 bp Feature: domain Description: HNHc Note: nucleases Location: 12376-12508 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507), Maff2 (pfam12750), Flg_new (pfam09479)