myRT

myRT report for GCA_002148835.1_ASM214883v1

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Seq: NCTN01000001.1 Klebsiella pneumoniae strain KPN11 KPN11_chr_part_1, whole genome shotgun sequence (5069972 bp)
Overview 1 RT 1: 164574-169265 bp 2 RT 2: 348698-351664 bp 3 RT 3: 3756172-3760279 bp Neighborhood of RT #1 [164574, 169265] sulfatase_like sulfatase_like PHA02517 RVT-GII GIIM Neighborhood of RT #2 [348698, 351664] RVT-GII GIIM PHA02517 Neighborhood of RT #3 [3756172, 3760281] DinI RVT-GII PRK10276 umuC Feature: gene Location: 164574-166442 bp Feature: domain Description: sulfatase_like Location: 164754-166173 bp Feature: domain Description: sulfatase_like Location: 1 64754-1 661 73 bp Feature: domain Description: sulfatase_like Location: 166230-166338 bp Feature: domain Description: sulfatase_like Location: 1 66230-1 66338 bp Feature: gene Location: 166539-166996 bp Feature: domain Description: PHA02517 Location: 166542-166809 bp Feature: domain Description: PHA0251 7 Location: 1 66542-1 66809 bp Feature: gene Location: 167077-168585 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 167335-168067 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 67335-1 68067 bp Feature: domain Description: GIIM Note: maturase Location: 168142-168340 bp Feature: domain Description: GIIM Note: maturase Location: 1 681 42-1 68340 bp Feature: gene Location: 168554-168979 bp Feature: gene Location: 168894-169265 bp Feature: gene Location: 348698-349069 bp Feature: gene Location: 348984-349409 bp Feature: gene Location: 349378-350886 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 349636-350368 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 349636-350368 bp Feature: domain Description: GIIM Note: maturase Location: 350443-350641 bp Feature: domain Description: GIIM Note: maturase Location: 350443-350641 bp Feature: gene Location: 350967-351425 bp Feature: domain Description: PHA02517 Location: 350970-351417 bp Feature: domain Description: PHA0251 7 Location: 350970-351 41 7 bp Feature: gene Location: 351422-351664 bp Feature: gene Location: 3756172-3756414 bp Feature: domain Description: DinI Location: 3756223-3756403 bp Feature: domain Description: DinI Location: 3756223-3756403 bp Feature: gene Location: 3756780-3757031 bp Feature: gene Location: 3757031-3758515 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3757433-3758123 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3757433-37581 23 bp Feature: gene Location: 3758594-3759013 bp Feature: domain Description: PRK10276 Location: 3758597-3759008 bp Feature: domain Description: PRK1 0276 Location: 3758597-3759008 bp Feature: gene Location: 3759016-3760281 bp Feature: domain Description: umuC Location: 3759019-3760279 bp Feature: domain Description: umuC Location: 375901 9-3760279 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT sulfatase_like (cd16156), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), DinI (pfam06183), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609)

Seq: NCTN01000003.1 Klebsiella pneumoniae strain KPN11 plasmid pKPN11-1, whole genome shotgun sequence (330476 bp)
Overview 1 RT 1: 164693-167716 bp 2 RT 2: 201603-204004 bp 3 RT 3: 274221-277944 bp Neighborhood of RT #1 [164693, 167716] RVT-GII GIIM PHA02517 Neighborhood of RT #2 [201603, 204004] PRK10276 RVT-GII Rve Neighborhood of RT #3 [274221, 277946] PRK10276 RVT-GII Antirestrict Feature: gene Location: 164693-165097 bp Feature: gene Location: 165012-165437 bp Feature: gene Location: 165406-166914 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 165664-166396 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 165664-166396 bp Feature: domain Description: GIIM Note: maturase Location: 166471-166669 bp Feature: domain Description: GIIM Note: maturase Location: 166471-166669 bp Feature: gene Location: 166983-167465 bp Feature: domain Description: PHA02517 Location: 167001-167439 bp Feature: domain Description: PHA02 517 Location: 167001-167439 bp Feature: gene Location: 167531-167716 bp Feature: gene Location: 201603-202034 bp Feature: domain Description: PRK10276 Location: 201654-202017 bp Feature: domain Description: PRK102 76 Location: 2 01654-2 02 017 bp Feature: gene Location: 202192-202443 bp Feature: gene Location: 202518-203177 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 202845-203172 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 02 845-2 03172 bp Feature: gene Location: 203235-203939 bp Feature: domain Description: Rve Location: 203238-203883 bp Feature: domain Description: Rve Location: 2 032 38-2 03883 bp Feature: gene Location: 203885-204004 bp Feature: gene Location: 274221-274646 bp Feature: domain Description: PRK10276 Location: 274224-274632 bp Feature: domain Description: PRK102 76 Location: 2 742 2 4-2 74632 bp Feature: gene Location: 274801-275052 bp Feature: gene Location: 275052-276536 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 275454-276144 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 75454-2 76144 bp Feature: gene Location: 276770-277000 bp Feature: gene Location: 277521-277946 bp Feature: domain Description: Antirestrict Location: 277656-277944 bp Feature: domain Description: Antirestrict Location: 2 77656-2 77944 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), Rve (COG3316), Antirestrict (pfam03230)

Seq: NCTN01000004.1 Klebsiella pneumoniae strain KPN11 plasmid pKPN11-2, whole genome shotgun sequence (79539 bp)
Overview 1 RT 1: 28417-32499 bp Neighborhood of RT #1 [28417, 32636] PRK10276 RVT-GII StbA Plasmid_stab_B Plasmid_stab_B Feature: gene Location: 28417-28848 bp Feature: domain Description: PRK10276 Location: 28468-28831 bp Feature: domain Description: PRK10276 Location: 28468-2883 1 bp Feature: gene Location: 29007-29258 bp Feature: gene Location: 29258-30742 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 29660-30350 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 29660-3 03 50 bp Feature: gene Location: 30991-31962 bp Feature: domain Description: StbA Location: 30994-31939 bp Feature: domain Description: StbA Location: 3 0994-3 193 9 bp Feature: gene Location: 31965-32636 bp Feature: domain Description: Plasmid_stab_B Location: 31980-32187 bp Feature: domain Description: Plasmid_stab_B Location: 3 1980-3 2187 bp Feature: domain Description: Plasmid_stab_B Location: 32292-32499 bp Feature: domain Description: Plasmid_stab_B Location: 3 2292-3 2499 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, StbA (pfam06406), Plasmid_stab_B (pfam10784)