myRT

myRT report for GCA_002150645.1_ASM215064v1

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Seq: MSYN01000060.1 Klebsiella pneumoniae strain C2-D8-12 NA-C2_S124_R1__paired__contig_60, whole genome shotgun sequence (13963 bp)
Overview 1 RT 1: 4748-7942 bp Neighborhood of RT #1 [4748, 7956] RVT-GII PRK10276 Feature: gene Location: 4748-4960 bp Feature: gene Location: 5130-5360 bp Feature: gene Location: 5594-7126 bp Ori: OUD59881.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5996-6734 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5996-6734 bp Feature: gene Location: 7126-7377 bp Feature: gene Location: 7531-7956 bp Ori: OUD59883.1 Feature: domain Description: PRK10276 Location: 7534-7942 bp Feature: domain Description: PRK1 0276 Location: 7534-7942 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit)

Seq: MSYN01000044.1 Klebsiella pneumoniae strain C2-D8-12 NA-C2_S124_R1__paired__contig_44, whole genome shotgun sequence (130262 bp)
Overview 1 RT 1: 31426-38807 bp Neighborhood of RT #1 [31426, 38824] PRK09692 Integrase_1 RVT-UG4 FimD FimC Feature: gene Location: 31426-32664 bp Feature: domain Description: PRK09692 Location: 31432-32614 bp Feature: domain Description: PRK09692 Location: 31432 -32 614 bp Feature: gene Location: 32844-33299 bp Ori: OUD60446.1 Feature: domain Description: Integrase_1 Location: 32847-33081 bp Feature: domain Description: Integrase_1 Location: 32 847-33081 bp Feature: gene Location: 33341-35422 bp Ori: OUD60447.1 Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 33752-34196 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 33752 -34196 bp Feature: gene Location: 35419-38013 bp Ori: OUD60448.1 Feature: domain Description: FimD Location: 35461-38002 bp Feature: domain Description: FimD Location: 35461-38002 bp Feature: gene Location: 38060-38824 bp Ori: OUD60449.1 Feature: domain Description: FimC Location: 38105-38807 bp Feature: domain Description: FimC Location: 38105-38807 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09692 (Integrase; provisional), Integrase_1 (pfam12835), RVT-UG4, FimD (COG3188), FimC (COG3121)

Seq: MSYN01000058.1 Klebsiella pneumoniae strain C2-D8-12 NA-C2_S124_R1__paired__contig_58, whole genome shotgun sequence (3098 bp)
Overview 1 RT 1: 225-2410 bp Neighborhood of RT #1 [225, 2410] RVT-GII GIIM Feature: gene Location: 225-1733 bp Ori: OUD60014.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 483-1215 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 483 -1215 bp Feature: domain Description: GIIM Note: maturase Location: 1290-1488 bp Feature: domain Description: GIIM Note: maturase Location: 1290-1488 bp Feature: gene Location: 1702-2127 bp Feature: gene Location: 2042-2410 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: MSYN01000061.1 Klebsiella pneumoniae strain C2-D8-12 NA-C2_S124_R1__paired__contig_61, whole genome shotgun sequence (23499 bp)
Overview 1 RT 1: 15668-19018 bp Neighborhood of RT #1 [15668, 19018] ArdC RVT-GII Feature: gene Location: 15668-16633 bp Ori: OUD59857.1 Feature: domain Description: ArdC Location: 15794-16628 bp Feature: domain Description: ArdC Location: 15794 -16628 bp Feature: gene Location: 17042-17110 bp Feature: gene Location: 17103-18587 bp Ori: OUD59858.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17505-18195 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17505-18195 bp Feature: gene Location: 18587-18838 bp Feature: gene Location: 18903-19018 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ArdC (COG4227), RVT-GII