myRT

myRT report for GCA_002151255.1_ASM215125v1

Download annotations/find similar RTs

Seq: MUZF01000003.1 Burkholderia territorii strain A63 FCC5L5NANXX-wHAIPI019282-68_contig_3, whole genome shotgun sequence (94359 bp)
Overview 1 RT 1: 11618-15319 bp Neighborhood of RT #1 [11618, 15390] FIN RVT-Retrons Histone_HNS Feature: gene Location: 11618-11890 bp Feature: gene Location: 12514-13086 bp Feature: domain Description: FIN Location: 12691-13048 bp Feature: domain Description: FIN Location: 1 2691 -1 3048 bp Feature: gene Location: 13340-14689 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 13805-14441 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 3805-1 4441 bp Feature: gene Location: 14748-14931 bp Feature: gene Location: 15061-15390 bp Feature: domain Description: Histone_HNS Location: 15082-15319 bp Feature: domain Description: Histone_HNS Location: 1 5082-1 531 9 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FIN (cd16389), RVT-Retrons, Histone_HNS (pfam00816)

Seq: MUZF01000027.1 Burkholderia territorii strain A63 FCC5L5NANXX-wHAIPI019282-68_contig_27, whole genome shotgun sequence (24829 bp)
Overview 1 RT 1: 5509-10046 bp Neighborhood of RT #1 [5509, 10099] HTH_21 RVT_N RVT-GII GIIM DEDD_Tnp_IS110 COG3547 Feature: gene Location: 5509-6176 bp Feature: domain Description: HTH_21 Location: 5515-5605 bp Feature: domain Description: HTH_2 1 Location: 5515-5605 bp Feature: gene Location: 6181-6438 bp Feature: gene Location: 6464-7963 bp Feature: RT Description: RVT_N Location: 6527-6764 bp Feature: RT Description: RVT_N Location: 652 7-6764 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6815-7457 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6815-7457 bp Feature: domain Description: GIIM Note: maturase Location: 7508-7742 bp Feature: domain Description: GIIM Note: maturase Location: 7508-7742 bp Feature: gene Location: 8265-9610 bp Feature: domain Description: DEDD_Tnp_IS110 Location: 8319-8745 bp Feature: domain Description: DEDD_Tnp_IS110 Location: 8319-8745 bp Feature: gene Location: 9695-10099 bp Feature: domain Description: COG3547 Location: 9701-10046 bp Feature: domain Description: COG3547 Location: 9701-10046 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_21 (pfam13276), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), DEDD_Tnp_IS110 (pfam01548), COG3547 (Transposase )

Seq: MUZF01000249.1 Burkholderia territorii strain A63 FCC5L5NANXX-wHAIPI019282-68_contig_251, whole genome shotgun sequence (1812 bp)
Overview 1 RT 1: 1-1782 bp Neighborhood of RT #1 [1, 1782] RVT_N RVT-GII Feature: gene Location: 1-670 bp Feature: RT Description: RVT_N Location: 64-301 bp Feature: RT Description: RVT_N Location: 64-3 01 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 352-643 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 52-643 bp Feature: gene Location: 1561-1782 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII