myRT

myRT report for GCA_002151955.1_ASM215195v1

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Seq: NGRP01000002.1 Enterobacter kobei strain MGH178 scaffold00002, whole genome shotgun sequence (156953 bp)
Overview 1 RT 1: 88315-93392 bp Neighborhood of RT #1 [88315, 93460] InsE PHA02517 RVT-GII GIIM APH APH_6_hur Feature: gene Location: 88315-88590 bp Ori: OUF18644.1 Feature: domain Description: InsE Location: 88327-88576 bp Feature: domain Description: InsE Location: 88327-88576 bp Feature: gene Location: 88587-89060 bp Ori: OUF18645.1 Feature: domain Description: PHA02517 Location: 88677-88995 bp Feature: domain Description: PHA0251 7 Location: 88677-88995 bp Feature: gene Location: 89652-91175 bp Ori: OUF18646.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 89925-90657 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 89925-90657 bp Feature: domain Description: GIIM Note: maturase Location: 90732-90930 bp Feature: domain Description: GIIM Note: maturase Location: 90732-90930 bp Feature: gene Location: 92205-92624 bp Ori: OUF18647.1 Feature: domain Description: APH Location: 92217-92616 bp Feature: domain Description: APH Location: 9221 7-9261 6 bp Feature: gene Location: 92624-93460 bp Ori: OUF18648.1 Feature: domain Description: APH_6_hur Location: 92654-93392 bp Feature: domain Description: APH_6_hur Location: 92654-93392 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), APH (pfam01636), APH_6_hur (pfam04655)

Seq: NGRP01000001.1 Enterobacter kobei strain MGH178 scaffold00001, whole genome shotgun sequence (4738337 bp)
Overview 1 RT 1: 506033-511478 bp 2 RT 2: 695565-699744 bp Neighborhood of RT #1 [506033, 511480] RVT-UG11 PRK10201 PRK05658 Neighborhood of RT #2 [695565, 699746] YecR RVT-GII GIIM PRK10141 ArsD Feature: gene Location: 506033-506449 bp Feature: gene Location: 507307-507471 bp Feature: gene Location: 507449-508210 bp Ori: OUF19840.1 Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 507575-508028 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 507575-50802 8 bp Feature: gene Location: 508604-509110 bp Ori: OUF19841.1 Feature: domain Description: PRK10201 Location: 508607-509105 bp Feature: domain Description: PRK102 01 Location: 508607-509105 bp Feature: gene Location: 509636-511480 bp Ori: OUF19842.1 Feature: domain Description: PRK05658 Location: 509642-511478 bp Feature: domain Description: PRK05658 Location: 509642 -511478 bp Feature: gene Location: 695565-695885 bp Ori: OUF20014.1 Feature: domain Description: YecR Location: 695649-695865 bp Feature: domain Description: YecR Location: 695649-695865 bp Feature: gene Location: 696080-696217 bp Feature: gene Location: 697382-698905 bp Ori: OUF20016.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 697655-698387 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 697655-698387 bp Feature: domain Description: GIIM Note: maturase Location: 698462-698660 bp Feature: domain Description: GIIM Note: maturase Location: 698462 -698660 bp Feature: gene Location: 698930-699334 bp Ori: OUF20017.1 Feature: domain Description: PRK10141 Location: 698990-699329 bp Feature: domain Description: PRK10141 Location: 698990-69932 9 bp Feature: gene Location: 699384-699746 bp Ori: OUF20018.1 Feature: domain Description: ArsD Location: 699387-699744 bp Feature: domain Description: ArsD Location: 699387-699744 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG11, PRK10201 (G/U mismatch-specific DNA glycosylase), PRK05658 (RNA polymerase sigma factor RpoD; Validated), YecR (pfam13992), RVT-GII, GIIM (pfam08388), PRK10141 (DNA-binding transcriptional repressor ArsR; Provisional), ArsD (pfam06953)