myRT

myRT report for GCA_002152055.1_ASM215205v1

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Seq: NGRS01000001.1 Enterobacter cloacae strain UCI102 scaffold00001, whole genome shotgun sequence (4771937 bp)
Overview 1 RT 1: 1145316-1150146 bp Neighborhood of RT #1 [1145316, 1150146] RVT-UG7 PRK09692 Feature: gene Location: 1145316-1145972 bp Feature: gene Location: 1145969-1147597 bp Ori: OUF38408.1 Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 1146377-1146806 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 1 1 46377-1 1 46806 bp Feature: gene Location: 1147600-1148799 bp Ori: OUF38409.1 Feature: domain Description: PRK09692 Location: 1147603-1148791 bp Feature: domain Description: PRK09692 Location: 1 1 47603-1 1 48791 bp Feature: gene Location: 1149130-1150146 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG7, PRK09692 (Integrase; provisional)

Seq: NGRS01000002.1 Enterobacter cloacae strain UCI102 scaffold00002, whole genome shotgun sequence (164449 bp)
Overview 1 RT 1: 52559-58009 bp 2 RT 2: 105092-108916 bp 3 RT 3: 121476-124151 bp Neighborhood of RT #1 [52559, 58009] DUF905 PRK13732 RVT-GII Intron_maturas2 HNHc Neighborhood of RT #2 [105092, 108918] InsE PHA02517 RVT-GII GIIM PHA02517 InsE Neighborhood of RT #3 [121476, 124159] InsE PHA02517 RVT-GII PRK10173 PRK10173 Feature: gene Location: 52559-52792 bp Ori: OUF32527.1 Feature: domain Description: DUF905 Location: 52589-52787 bp Feature: domain Description: DUF905 Location: 52 589-52 787 bp Feature: gene Location: 52855-53307 bp Ori: OUF32528.1 Feature: domain Description: PRK13732 Location: 52858-53305 bp Feature: domain Description: PRK13732 Location: 52 858-53305 bp Feature: gene Location: 53502-55403 bp Ori: OUF32529.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 53769-54600 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 53769-54600 bp Feature: domain Description: Intron_maturas2 Location: 54714-54972 bp Feature: domain Description: Intron_maturas2 Location: 54714-54972 bp Feature: domain Description: HNHc Note: nucleases Location: 55146-55308 bp Feature: domain Description: HNHc Note: nucleases Location: 55146-55308 bp Feature: gene Location: 56432-56519 bp Feature: gene Location: 57815-58009 bp Feature: gene Location: 105092-105496 bp Ori: OUF32583.1 Feature: domain Description: InsE Location: 105122-105458 bp Feature: domain Description: InsE Location: 10512 2 -105458 bp Feature: gene Location: 105525-105881 bp Ori: OUF32584.1 Feature: domain Description: PHA02517 Location: 105528-105837 bp Feature: domain Description: PHA02 517 Location: 10552 8-105837 bp Feature: gene Location: 105998-107521 bp Ori: OUF32585.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 106271-107003 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1062 71-107003 bp Feature: domain Description: GIIM Note: maturase Location: 107078-107276 bp Feature: domain Description: GIIM Note: maturase Location: 107078-1072 76 bp Feature: gene Location: 108113-108592 bp Ori: OUF32586.1 Feature: domain Description: PHA02517 Location: 108173-108527 bp Feature: domain Description: PHA02 517 Location: 108173-10852 7 bp Feature: gene Location: 108592-108918 bp Ori: OUF32587.1 Feature: domain Description: InsE Location: 108595-108916 bp Feature: domain Description: InsE Location: 108595-108916 bp Feature: gene Location: 121476-121802 bp Ori: OUF32599.1 Feature: domain Description: InsE Location: 121479-121800 bp Feature: domain Description: InsE Location: 12 1479-12 1800 bp Feature: gene Location: 121802-122281 bp Ori: OUF32600.1 Feature: domain Description: PHA02517 Location: 121862-122216 bp Feature: domain Description: PHA02 517 Location: 12 1862 -12 2 2 16 bp Feature: gene Location: 122873-123376 bp Ori: OUF32601.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 123146-123215 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12 3146-12 32 15 bp Feature: gene Location: 123415-123735 bp Ori: OUF32602.1 Feature: domain Description: PRK10173 Location: 123418-123646 bp Feature: domain Description: PRK10173 Location: 12 3418-12 3646 bp Feature: gene Location: 123710-124159 bp Ori: OUF32603.1 Feature: domain Description: PRK10173 Location: 123713-124151 bp Feature: domain Description: PRK10173 Location: 12 3713-12 4151 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF905 (pfam06006), PRK13732 (single-stranded DNA-binding protein; Provisional), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), GIIM (pfam08388), PRK10173 (glucose-1-phosphatase/inositol phosphatase; Provisional)