myRT

myRT report for GCA_002152365.1_ASM215236v1

Download annotations/find similar RTs

Seq: NGSR01000001.1 Klebsiella pneumoniae strain BWH67 scaffold00001, whole genome shotgun sequence (5255089 bp)
Overview 1 RT 1: 3617301-3623275 bp Neighborhood of RT #1 [3617301, 3623275] HTH_1 PBP2_DntR_like_1 MFS_MMR_MDR_like RVT-UG17 RVT-UG17 SLATT_5 Feature: gene Location: 3617301-3618230 bp Ori: OUG57303.1 Feature: domain Description: HTH_1 Location: 3617319-3617490 bp Feature: domain Description: HTH_1 Location: 361 731 9-361 7490 bp Feature: domain Description: PBP2_DntR_like_1 Location: 3617595-3618192 bp Feature: domain Description: PBP2_DntR_like_1 Location: 361 7595-361 81 92 bp Feature: gene Location: 3618360-3619748 bp Ori: OUG57304.1 Feature: domain Description: MFS_MMR_MDR_like Location: 3618435-3619638 bp Feature: domain Description: MFS_MMR_MDR_like Location: 361 8435-361 9638 bp Feature: gene Location: 3620098-3620976 bp Ori: OUG57305.1 Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 3620104-3620440 bp Feature: RT Description: RVT-UG1 7 Note: UG1 7 RT Location: 36201 04-3620440 bp Feature: gene Location: 3621052-3621714 bp Ori: OUG57306.1 Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 3621280-3621709 bp Feature: RT Description: RVT-UG1 7 Note: UG1 7 RT Location: 3621 280-3621 709 bp Feature: gene Location: 3621704-3622243 bp Ori: OUG57307.1 Feature: domain Description: SLATT_5 Location: 3621710-3622226 bp Feature: domain Description: SLATT_5 Location: 3621 71 0-3622226 bp Feature: gene Location: 3622949-3623275 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_1 (pfam00126), PBP2_DntR_like_1 (cd08460), MFS_MMR_MDR_like (cd17504), RVT-UG17, SLATT_5 (pfam18160)

Seq: NGSR01000002.1 Klebsiella pneumoniae strain BWH67 scaffold00002, whole genome shotgun sequence (187296 bp)
Overview 1 RT 1: 168696-173765 bp Neighborhood of RT #1 [168696, 173767] PRK10276 zf-ISL3 HTH_Tnp_ISL3 DDE_Tnp_ISL3 RVT-GII Antirestrict Feature: gene Location: 168696-169121 bp Ori: OUG52783.1 Feature: domain Description: PRK10276 Location: 168699-169107 bp Feature: domain Description: PRK102 76 Location: 168699-169107 bp Feature: gene Location: 169183-170403 bp Ori: OUG52784.1 Feature: domain Description: zf-ISL3 Location: 169315-169441 bp Feature: domain Description: zf-ISL3 Location: 169315-169441 bp Feature: domain Description: HTH_Tnp_ISL3 Location: 169459-169606 bp Feature: domain Description: HTH_Tnp_ISL3 Location: 169459-169606 bp Feature: domain Description: DDE_Tnp_ISL3 Location: 169657-170362 bp Feature: domain Description: DDE_Tnp_ISL3 Location: 169657-170362 bp Feature: gene Location: 170925-172358 bp Ori: OUG52785.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 171252-171966 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1712 52 -171966 bp Feature: gene Location: 172592-172822 bp Feature: gene Location: 173342-173767 bp Ori: OUG52787.1 Feature: domain Description: Antirestrict Location: 173477-173765 bp Feature: domain Description: Antirestrict Location: 173477-173765 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), zf-ISL3 (pfam14690), HTH_Tnp_ISL3 (pfam13542), DDE_Tnp_ISL3 (pfam01610), RVT-GII, Antirestrict (pfam03230)