myRT

myRT report for GCA_002152435.1_ASM215243v1

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Seq: NGSV01000002.1 Klebsiella pneumoniae strain MGH134 scaffold00002, whole genome shotgun sequence (310156 bp)
Overview 1 RT 1: 21805-25665 bp 2 RT 2: 54286-59203 bp 3 RT 3: 105375-110387 bp Neighborhood of RT #1 [21805, 25709] PHA02517 DDE_Tnp_1_5 RVT-GII GIIM IS5 GntR Neighborhood of RT #2 [54286, 59736] PHA02517 COG3547 RVT-GII GIIM PHA02517 DDE_Tnp_1_5 Neighborhood of RT #3 [105375, 110387] HHA RVT-GII INT_Cre_C Feature: gene Location: 21805-22077 bp Ori: OUG79479.1 Feature: domain Description: PHA02517 Location: 21811-22060 bp Feature: domain Description: PHA0251 7 Location: 21 81 1 -22060 bp Feature: gene Location: 22273-23196 bp Ori: OUG79480.1 Feature: domain Description: DDE_Tnp_1_5 Location: 22330-22663 bp Feature: domain Description: DDE_Tnp_1 _5 Location: 22330-22663 bp Feature: gene Location: 23363-23995 bp Ori: OUG79481.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 23372-23477 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 23372-23477 bp Feature: domain Description: GIIM Note: maturase Location: 23549-23750 bp Feature: domain Description: GIIM Note: maturase Location: 23549-23750 bp Feature: gene Location: 24613-24882 bp Ori: OUG79482.1 Feature: domain Description: IS5 Location: 24625-24877 bp Feature: domain Description: IS5 Location: 24625-24877 bp Feature: gene Location: 25047-25709 bp Ori: OUG79483.1 Feature: domain Description: GntR Location: 25053-25665 bp Feature: domain Description: GntR Location: 25053-25665 bp Feature: gene Location: 54286-54492 bp Ori: OUG79511.1 Feature: domain Description: PHA02517 Location: 54289-54481 bp Feature: domain Description: PHA0251 7 Location: 54289-54481 bp Feature: gene Location: 54611-55687 bp Ori: OUG79512.1 Feature: domain Description: COG3547 Location: 54650-55571 bp Feature: domain Description: COG3547 Location: 54650-55571 bp Feature: gene Location: 56229-57752 bp Ori: OUG79513.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 56502-57234 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 56502-57234 bp Feature: domain Description: GIIM Note: maturase Location: 57309-57507 bp Feature: domain Description: GIIM Note: maturase Location: 57309-57507 bp Feature: gene Location: 58344-58583 bp Ori: OUG79514.1 Feature: domain Description: PHA02517 Location: 58347-58518 bp Feature: domain Description: PHA0251 7 Location: 58347-5851 8 bp Feature: gene Location: 58813-59736 bp Ori: OUG79515.1 Feature: domain Description: DDE_Tnp_1_5 Location: 58870-59203 bp Feature: domain Description: DDE_Tnp_1 _5 Location: 58870-59203 bp Feature: gene Location: 105375-106442 bp Feature: gene Location: 106528-106782 bp Ori: OUG79554.1 Feature: domain Description: HHA Location: 106579-106762 bp Feature: domain Description: HHA Location: 1 06579-1 06762 bp Feature: gene Location: 107295-108782 bp Ori: OUG79555.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 107700-108390 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 07700-1 08390 bp Feature: gene Location: 108868-110004 bp Ori: OUG79556.1 Feature: domain Description: INT_Cre_C Location: 109291-109945 bp Feature: domain Description: INT_Cre_C Location: 1 09291 -1 09945 bp Feature: gene Location: 110070-110387 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), DDE_Tnp_1_5 (pfam13737), RVT-GII, GIIM (pfam08388), IS5 (COG3039), GntR (pfam00392), COG3547 (Transposase ), HHA (pfam05321), INT_Cre_C (cd00799)

Seq: NGSV01000001.1 Klebsiella pneumoniae strain MGH134 scaffold00001, whole genome shotgun sequence (5204068 bp)
Overview 1 RT 1: 4308042-4312768 bp Neighborhood of RT #1 [4308042, 4312827] PRK09692 RVT-Retrons Psu PRK09678 Feature: gene Location: 4308042-4309214 bp Ori: OUG85229.1 Feature: domain Description: PRK09692 Location: 4308051-4309209 bp Feature: domain Description: PRK09692 Location: 4308051-43092 09 bp Feature: gene Location: 4309328-4310056 bp Feature: gene Location: 4310057-4311544 bp Ori: OUG85231.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 4310765-4311320 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 4310765-431132 0 bp Feature: gene Location: 4311999-4312565 bp Ori: OUG85232.1 Feature: domain Description: Psu Location: 4312017-4312560 bp Feature: domain Description: Psu Location: 4312 017-4312 560 bp Feature: gene Location: 4312582-4312827 bp Ori: OUG85233.1 Feature: domain Description: PRK09678 Location: 4312585-4312768 bp Feature: domain Description: PRK09678 Location: 4312 585-4312 768 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09692 (Integrase; provisional), RVT-Retrons, Psu (pfam07455), PRK09678 (DNA-binding transcriptional regulator; Provisional)