myRT

myRT report for GCA_002152485.1_ASM215248v1

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Seq: NGTA01000003.1 Klebsiella pneumoniae strain MGH153 scaffold00003, whole genome shotgun sequence (158122 bp)
Overview 1 RT 1: 53827-56495 bp Neighborhood of RT #1 [53827, 56740] COG3547 RVT-GII GIIM Feature: gene Location: 53827-53887 bp Feature: gene Location: 53848-54924 bp Feature: domain Description: COG3547 Location: 53887-54808 bp Feature: domain Description: COG3547 Location: 53887-54808 bp Feature: gene Location: 55466-56740 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 55490-56222 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 55490-56222 bp Feature: domain Description: GIIM Note: maturase Location: 56336-56495 bp Feature: domain Description: GIIM Note: maturase Location: 56336-56495 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3547 (Transposase ), RVT-GII, GIIM (pfam08388)

Seq: NGTA01000001.1 Klebsiella pneumoniae strain MGH153 scaffold00001, whole genome shotgun sequence (3654084 bp)
Overview 1 RT 1: 940669-945081 bp Neighborhood of RT #1 [940669, 945083] RVT-GII dacD SbcB Feature: gene Location: 940669-941794 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 941071-941761 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 941071-941761 bp Feature: gene Location: 942315-943478 bp Feature: domain Description: dacD Location: 942318-943473 bp Feature: domain Description: dacD Location: 942 318-943473 bp Feature: gene Location: 943659-945083 bp Feature: domain Description: SbcB Location: 943665-945081 bp Feature: domain Description: SbcB Location: 943665-945081 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, dacD (PRK11397), SbcB (COG2925)

Seq: NGTA01000002.1 Klebsiella pneumoniae strain MGH153 scaffold00002, whole genome shotgun sequence (1757936 bp)
Overview 1 RT 1: 1357049-1362467 bp Neighborhood of RT #1 [1357049, 1362469] GT9_LPS_heptosyltransferase DinI RVT-GII PRK10276 umuC Feature: gene Location: 1357049-1358188 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1357232-1358132 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 13 5723 2-13 5813 2 bp Feature: gene Location: 1358359-1358601 bp Feature: domain Description: DinI Location: 1358410-1358590 bp Feature: domain Description: DinI Location: 13 58410-13 58590 bp Feature: gene Location: 1359219-1360703 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1359621-1360311 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13 59621-13 603 11 bp Feature: gene Location: 1360782-1361201 bp Feature: domain Description: PRK10276 Location: 1360785-1361196 bp Feature: domain Description: PRK10276 Location: 13 60785-13 61196 bp Feature: gene Location: 1361204-1362469 bp Feature: domain Description: umuC Location: 1361207-1362467 bp Feature: domain Description: umuC Location: 13 61207-13 62467 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT GT9_LPS_heptosyltransferase (cd03789), DinI (pfam06183), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609)