myRT

myRT report for GCA_002152525.1_ASM215252v1

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Seq: NGTD01000001.1 Klebsiella pneumoniae strain MGH157 scaffold00001, whole genome shotgun sequence (4591737 bp)
Overview 1 RT 1: 1351700-1357118 bp 2 RT 2: 2627540-2630692 bp 3 RT 3: 3892936-3901391 bp Neighborhood of RT #1 [1351700, 1357120] GT9_LPS_heptosyltransferase DinI RVT-GII PRK10276 umuC Neighborhood of RT #2 [2627540, 2630692] PRK10276 RVT-GII Neighborhood of RT #3 [3892936, 3901408] YqgA PRK09692 RVT-UG4 FimD FimC Feature: gene Location: 1351700-1352839 bp Ori: OUH27652.1 Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1351883-1352783 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1 351 883-1 352783 bp Feature: gene Location: 1353010-1353252 bp Ori: OUH27653.1 Feature: domain Description: DinI Location: 1353061-1353241 bp Feature: domain Description: DinI Location: 1 353061 -1 353241 bp Feature: gene Location: 1353867-1355354 bp Ori: OUH27654.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1354272-1354962 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 354272-1 354962 bp Feature: gene Location: 1355433-1355852 bp Ori: OUH27655.1 Feature: domain Description: PRK10276 Location: 1355436-1355847 bp Feature: domain Description: PRK1 0276 Location: 1 355436-1 355847 bp Feature: gene Location: 1355855-1357120 bp Ori: OUH27656.1 Feature: domain Description: umuC Location: 1355858-1357118 bp Feature: domain Description: umuC Location: 1 355858-1 3571 1 8 bp Feature: gene Location: 2627540-2627857 bp Ori: OUH28838.1 Feature: domain Description: PRK10276 Location: 2627546-2627663 bp Feature: domain Description: PRK1 0276 Location: 2627546-2627663 bp Feature: gene Location: 2627857-2628096 bp Feature: gene Location: 2628174-2629661 bp Ori: OUH28840.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2628579-2629269 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2628579-2629269 bp Feature: gene Location: 2630064-2630279 bp Feature: gene Location: 2630363-2630692 bp Feature: gene Location: 3892936-3893649 bp Ori: OUH29998.1 Feature: domain Description: YqgA Location: 3892942-3893644 bp Feature: domain Description: YqgA Location: 3892942-3893644 bp Feature: gene Location: 3894304-3895167 bp Ori: OUH29999.1 Feature: domain Description: PRK09692 Location: 3894328-3895165 bp Feature: domain Description: PRK09692 Location: 3894328-38951 65 bp Feature: gene Location: 3895925-3898006 bp Ori: OUH30000.1 Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 3896336-3896780 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 3896336-3896780 bp Feature: gene Location: 3898003-3900597 bp Ori: OUH30001.1 Feature: domain Description: FimD Location: 3898045-3900586 bp Feature: domain Description: FimD Location: 3898045-3900586 bp Feature: gene Location: 3900644-3901408 bp Ori: OUH30002.1 Feature: domain Description: FimC Location: 3900689-3901391 bp Feature: domain Description: FimC Location: 3900689-3901 391 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT GT9_LPS_heptosyltransferase (cd03789), DinI (pfam06183), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609), YqgA (COG1811), PRK09692 (Integrase; provisional), RVT-UG4, FimD (COG3188), FimC (COG3121)

Seq: NGTD01000003.1 Klebsiella pneumoniae strain MGH157 scaffold00003, whole genome shotgun sequence (277021 bp)
Overview 1 RT 1: 121177-127579 bp 2 RT 2: 264384-269397 bp Neighborhood of RT #1 [121177, 127587] cas7_csf2 RVT-GII PRK10276 umuC Neighborhood of RT #2 [264384, 269397] HHA RVT-GII INT_Cre_C Feature: gene Location: 121177-121884 bp Feature: gene Location: 121889-122920 bp Ori: OUH16958.1 Feature: domain Description: cas7_csf2 Location: 121937-122855 bp Feature: domain Description: cas7_csf2 Location: 12 1937-12 2 855 bp Feature: gene Location: 124321-125808 bp Ori: OUH16959.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 124726-125416 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12 472 6-12 5416 bp Feature: gene Location: 125894-126316 bp Ori: OUH16960.1 Feature: domain Description: PRK10276 Location: 125900-126302 bp Feature: domain Description: PRK102 76 Location: 12 5900-12 6302 bp Feature: gene Location: 126316-127587 bp Ori: OUH16961.1 Feature: domain Description: umuC Location: 126319-127579 bp Feature: domain Description: umuC Location: 12 6319-12 7579 bp Feature: gene Location: 264384-265451 bp Feature: gene Location: 265537-265791 bp Ori: OUH17080.1 Feature: domain Description: HHA Location: 265588-265771 bp Feature: domain Description: HHA Location: 2 65588-2 65771 bp Feature: gene Location: 266305-267792 bp Ori: OUH17081.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 266710-267400 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 66710-2 67400 bp Feature: gene Location: 267878-269014 bp Ori: OUH17082.1 Feature: domain Description: INT_Cre_C Location: 268301-268955 bp Feature: domain Description: INT_Cre_C Location: 2 68301-2 68955 bp Feature: gene Location: 269080-269397 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT cas7_csf2 (TIGR03115), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609), HHA (pfam05321), INT_Cre_C (cd00799)