myRT

myRT report for GCA_002152555.1_ASM215255v1

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Seq: NGTE01000001.1 Klebsiella pneumoniae strain MGH158 scaffold00001, whole genome shotgun sequence (5261072 bp)
Overview 1 RT 1: 1012962-1018045 bp 2 RT 2: 5081547-5086958 bp Neighborhood of RT #1 [1012962, 1018050] SLATT_5 RVT-UG17 PRK10597 Neighborhood of RT #2 [5081547, 5087221] PinE RVT-Retrons DDE_Tnp_1_5 HTH_XRE Feature: gene Location: 1012962-1013642 bp Feature: gene Location: 1014487-1015026 bp Ori: OUH40063.1 Feature: domain Description: SLATT_5 Location: 1014493-1015006 bp Feature: domain Description: SLATT_5 Location: 1 01 4493-1 01 5006 bp Feature: gene Location: 1015016-1016386 bp Ori: OUH40064.1 Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 1015244-1015850 bp Feature: RT Description: RVT-UG1 7 Note: UG1 7 RT Location: 1 01 5244-1 01 5850 bp Feature: gene Location: 1016760-1017092 bp Feature: gene Location: 1017817-1018050 bp Ori: OUH40066.1 Feature: domain Description: PRK10597 Location: 1017820-1018045 bp Feature: domain Description: PRK1 0597 Location: 1 01 7820-1 01 8045 bp Feature: gene Location: 5081547-5082029 bp Feature: gene Location: 5082174-5082839 bp Ori: OUH43794.1 Feature: domain Description: PinE Location: 5082192-5082804 bp Feature: domain Description: PinE Location: 50821 92-5082804 bp Feature: gene Location: 5083106-5084815 bp Ori: OUH43795.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 5083259-5083856 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 5083259-5083856 bp Feature: gene Location: 5085433-5086356 bp Ori: OUH43796.1 Feature: domain Description: DDE_Tnp_1_5 Location: 5085490-5085823 bp Feature: domain Description: DDE_Tnp_1 _5 Location: 5085490-5085823 bp Feature: gene Location: 5086742-5087221 bp Ori: OUH43797.1 Feature: domain Description: HTH_XRE Location: 5086787-5086958 bp Feature: domain Description: HTH_XRE Location: 5086787-5086958 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SLATT_5 (pfam18160), RVT-UG17, PRK10597 (DNA damage-inducible protein I; Provisional), PinE (COG1961), RVT-Retrons, DDE_Tnp_1_5 (pfam13737), HTH_XRE (smart00530)