myRT

myRT report for GCA_002152735.1_ASM215273v1

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Seq: NGTT01000002.1 Klebsiella pneumoniae strain UCI109 scaffold00002, whole genome shotgun sequence (1806058 bp)
Overview 1 RT 1: 584989-588396 bp 2 RT 2: 1025001-1030606 bp 3 RT 3: 1363828-1369294 bp 4 RT 4: 1538588-1544453 bp Neighborhood of RT #1 [584989, 588497] Laminin_G_3 RVT-GII PRK10276 PRK10276 Neighborhood of RT #2 [1025001, 1030632] YbjK int RVT-GII Phage_CI_repr Phage_CI_repr Phage_CI_C Neighborhood of RT #3 [1363828, 1369296] GT9_LPS_heptosyltransferase DinI RVT-GII RVT-GII PRK10276 umuC Neighborhood of RT #4 [1538588, 1544455] Rve PinE RVT-GII PRK10276 umuC Feature: gene Location: 584989-585720 bp Feature: domain Description: Laminin_G_3 Location: 585310-585664 bp Feature: domain Description: Laminin_G_3 Location: 58531 0-585664 bp Feature: gene Location: 585717-585926 bp Feature: gene Location: 586376-587863 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 586781-587471 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 586781 -587471 bp Feature: gene Location: 587941-588180 bp Feature: gene Location: 588180-588497 bp Feature: domain Description: PRK10276 Location: 588186-588300 bp Feature: domain Description: PRK1 0276 Location: 5881 86-588300 bp Feature: domain Description: PRK10276 Location: 588327-588396 bp Feature: domain Description: PRK1 0276 Location: 588327-588396 bp Feature: gene Location: 1025001-1025564 bp Feature: domain Description: YbjK Location: 1025007-1025544 bp Feature: domain Description: YbjK Location: 1 025007-1 025544 bp Feature: gene Location: 1025687-1026739 bp Feature: domain Description: int Location: 1025690-1026689 bp Feature: domain Description: int Location: 1 025690-1 026689 bp Feature: gene Location: 1027155-1028642 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1027560-1028250 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 027560-1 028250 bp Feature: gene Location: 1028741-1029685 bp Feature: gene Location: 1029697-1030632 bp Feature: domain Description: Phage_CI_repr Location: 1029781-1029964 bp Feature: domain Description: Phage_CI_repr Location: 1 029781 -1 029964 bp Feature: domain Description: Phage_CI_repr Location: 1030093-1030285 bp Feature: domain Description: Phage_CI_repr Location: 1 030093-1 030285 bp Feature: domain Description: Phage_CI_C Location: 1030312-1030606 bp Feature: domain Description: Phage_CI_C Location: 1 03031 2-1 030606 bp Feature: gene Location: 1363828-1364967 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1364011-1364911 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1 36401 1 -1 36491 1 bp Feature: gene Location: 1365138-1365380 bp Feature: domain Description: DinI Location: 1365189-1365369 bp Feature: domain Description: DinI Location: 1 3651 89-1 365369 bp Feature: gene Location: 1365995-1366501 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1366400-1366475 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 366400-1 366475 bp Feature: gene Location: 1366520-1367530 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1366526-1367138 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 366526-1 3671 38 bp Feature: gene Location: 1367609-1368028 bp Feature: domain Description: PRK10276 Location: 1367612-1368023 bp Feature: domain Description: PRK1 0276 Location: 1 36761 2-1 368023 bp Feature: gene Location: 1368031-1369296 bp Feature: domain Description: umuC Location: 1368034-1369294 bp Feature: domain Description: umuC Location: 1 368034-1 369294 bp Feature: gene Location: 1538588-1539292 bp Feature: domain Description: Rve Location: 1538591-1539236 bp Feature: domain Description: Rve Location: 1 538591 -1 539236 bp Feature: gene Location: 1539358-1539807 bp Feature: domain Description: PinE Location: 1539367-1539799 bp Feature: domain Description: PinE Location: 1 539367-1 539799 bp Feature: gene Location: 1541202-1542689 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1541607-1542297 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 541 607-1 542297 bp Feature: gene Location: 1542682-1543188 bp Feature: domain Description: PRK10276 Location: 1542772-1543183 bp Feature: domain Description: PRK1 0276 Location: 1 542772-1 5431 83 bp Feature: gene Location: 1543190-1544455 bp Feature: domain Description: umuC Location: 1543193-1544453 bp Feature: domain Description: umuC Location: 1 5431 93-1 544453 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Laminin_G_3 (pfam13385), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), YbjK (COG3226), int (PHA02601), Phage_CI_repr (pfam07022), Phage_CI_C (pfam16452), GT9_LPS_heptosyltransferase (cd03789), DinI (pfam06183), umuC (PRK03609)
Rve (COG3316), PinE (COG1961)

Seq: NGTT01000001.1 Klebsiella pneumoniae strain UCI109 scaffold00001, whole genome shotgun sequence (3705358 bp)
Overview 1 RT 1: 1080385-1086868 bp 2 RT 2: 1546040-1552352 bp Neighborhood of RT #1 [1080385, 1086870] YccC PRK10016 RVT-GII dacD SbcB Neighborhood of RT #2 [1546040, 1552366] PHA02515 RVT-GII IS5 Feature: gene Location: 1080385-1081443 bp Feature: domain Description: YccC Location: 1080391-1081429 bp Feature: domain Description: YccC Location: 1080391-108142 9 bp Feature: gene Location: 1081542-1082015 bp Feature: domain Description: PRK10016 Location: 1081545-1082004 bp Feature: domain Description: PRK10016 Location: 1081545-1082 004 bp Feature: gene Location: 1082097-1083584 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1082502-1083192 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1082 502 -1083192 bp Feature: gene Location: 1084102-1085265 bp Feature: domain Description: dacD Location: 1084105-1085260 bp Feature: domain Description: dacD Location: 1084105-10852 60 bp Feature: gene Location: 1085446-1086870 bp Feature: domain Description: SbcB Location: 1085452-1086868 bp Feature: domain Description: SbcB Location: 1085452 -1086868 bp Feature: gene Location: 1546040-1546192 bp Feature: gene Location: 1546201-1548567 bp Feature: domain Description: PHA02515 Location: 1546213-1546555 bp Feature: domain Description: PHA02 515 Location: 15462 13-1546555 bp Feature: gene Location: 1549105-1550592 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1549510-1550200 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1549510-15502 00 bp Feature: gene Location: 1550670-1550930 bp Feature: gene Location: 1551386-1552366 bp Feature: domain Description: IS5 Location: 1551575-1552352 bp Feature: domain Description: IS5 Location: 1551575-1552 352 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YccC (COG1289), PRK10016 (DNA gyrase inhibitor SbmC), RVT-GII, dacD (PRK11397), SbcB (COG2925), PHA02515 (hypothetical protein; Provisional), IS5 (COG3039)