myRT

myRT report for GCA_002152755.1_ASM215275v1

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Seq: NGTX01000001.1 Klebsiella pneumoniae strain UCI113 scaffold00001, whole genome shotgun sequence (4084611 bp)
Overview 1 RT 1: 46772-52190 bp 2 RT 2: 1476449-1482932 bp Neighborhood of RT #1 [46772, 52192] GT9_LPS_heptosyltransferase DinI RVT-GII PRK10276 umuC Neighborhood of RT #2 [1476449, 1482934] YccC PRK10016 RVT-GII dacD SbcB Feature: gene Location: 46772-47911 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 46955-47855 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 46955-47855 bp Feature: gene Location: 48082-48324 bp Feature: domain Description: DinI Location: 48133-48313 bp Feature: domain Description: DinI Location: 481 33-4831 3 bp Feature: gene Location: 48942-50426 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 49344-50034 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 49344-50034 bp Feature: gene Location: 50505-50924 bp Feature: domain Description: PRK10276 Location: 50508-50919 bp Feature: domain Description: PRK1 0276 Location: 50508-5091 9 bp Feature: gene Location: 50927-52192 bp Feature: domain Description: umuC Location: 50930-52190 bp Feature: domain Description: umuC Location: 50930-521 90 bp Feature: gene Location: 1476449-1477507 bp Feature: domain Description: YccC Location: 1476455-1477493 bp Feature: domain Description: YccC Location: 1 476455-1 477493 bp Feature: gene Location: 1477606-1478079 bp Feature: domain Description: PRK10016 Location: 1477609-1478068 bp Feature: domain Description: PRK1 001 6 Location: 1 477609-1 478068 bp Feature: gene Location: 1478161-1479645 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1478563-1479253 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 478563-1 479253 bp Feature: gene Location: 1480166-1481329 bp Feature: domain Description: dacD Location: 1480169-1481324 bp Feature: domain Description: dacD Location: 1 4801 69-1 481 324 bp Feature: gene Location: 1481510-1482934 bp Feature: domain Description: SbcB Location: 1481516-1482932 bp Feature: domain Description: SbcB Location: 1 481 51 6-1 482932 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT GT9_LPS_heptosyltransferase (cd03789), DinI (pfam06183), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609), YccC (COG1289), PRK10016 (DNA gyrase inhibitor SbmC), dacD (PRK11397), SbcB (COG2925)

Seq: NGTX01000002.1 Klebsiella pneumoniae strain UCI113 scaffold00002, whole genome shotgun sequence (1328143 bp)
Overview 1 RT 1: 979994-985599 bp Neighborhood of RT #1 [979994, 985625] YbjK int RVT-GII Phage_CI_repr Phage_CI_repr Phage_CI_C Feature: gene Location: 979994-980557 bp Feature: domain Description: YbjK Location: 980000-980537 bp Feature: domain Description: YbjK Location: 980000-980537 bp Feature: gene Location: 980680-981732 bp Feature: domain Description: int Location: 980683-981682 bp Feature: domain Description: int Location: 980683-981682 bp Feature: gene Location: 982151-983635 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 982553-983243 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 982 553-9832 43 bp Feature: gene Location: 983734-984678 bp Feature: gene Location: 984690-985625 bp Feature: domain Description: Phage_CI_repr Location: 984774-984957 bp Feature: domain Description: Phage_CI_repr Location: 984774-984957 bp Feature: domain Description: Phage_CI_repr Location: 985086-985278 bp Feature: domain Description: Phage_CI_repr Location: 985086-9852 78 bp Feature: domain Description: Phage_CI_C Location: 985305-985599 bp Feature: domain Description: Phage_CI_C Location: 985305-985599 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YbjK (COG3226), int (PHA02601), RVT-GII, Phage_CI_repr (pfam07022), Phage_CI_C (pfam16452)