myRT

myRT report for GCA_002152865.1_ASM215286v1

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Seq: NGUC01000001.1 Klebsiella pneumoniae strain UCI118 scaffold00001, whole genome shotgun sequence (5351180 bp)
Overview 1 RT 1: 3835045-3843663 bp Neighborhood of RT #1 [3835045, 3843680] YqgA PRK09692 RVT-UG4 FimD FimC Feature: gene Location: 3835045-3835758 bp Ori: OUI64359.1 Feature: domain Description: YqgA Location: 3835051-3835753 bp Feature: domain Description: YqgA Location: 3835051 -3835753 bp Feature: gene Location: 3836576-3837439 bp Ori: OUI64360.1 Feature: domain Description: PRK09692 Location: 3836600-3837437 bp Feature: domain Description: PRK09692 Location: 3836600-3837437 bp Feature: gene Location: 3838197-3840278 bp Ori: OUI64361.1 Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 3838608-3839052 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 3838608-3839052 bp Feature: gene Location: 3840275-3842869 bp Ori: OUI64362.1 Feature: domain Description: FimD Location: 3840317-3842858 bp Feature: domain Description: FimD Location: 384031 7-3842858 bp Feature: gene Location: 3842916-3843680 bp Ori: OUI64363.1 Feature: domain Description: FimC Location: 3842961-3843663 bp Feature: domain Description: FimC Location: 3842961 -3843663 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YqgA (COG1811), PRK09692 (Integrase; provisional), RVT-UG4, FimD (COG3188), FimC (COG3121)

Seq: NGUC01000002.1 Klebsiella pneumoniae strain UCI118 scaffold00002, whole genome shotgun sequence (234878 bp)
Overview 1 RT 1: 121651-126691 bp Neighborhood of RT #1 [121651, 126693] umuC PRK10276 RVT-GII Antirestrict Feature: gene Location: 121651-122922 bp Ori: OUI56035.1 Feature: domain Description: umuC Location: 121654-122917 bp Feature: domain Description: umuC Location: 12 1654-12 2 917 bp Feature: gene Location: 122922-123347 bp Ori: OUI56036.1 Feature: domain Description: PRK10276 Location: 122925-123333 bp Feature: domain Description: PRK102 76 Location: 12 2 92 5-12 3333 bp Feature: gene Location: 123827-125284 bp Ori: OUI56037.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 124154-124892 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12 4154-12 4892 bp Feature: gene Location: 125518-125748 bp Feature: gene Location: 126268-126693 bp Ori: OUI56039.1 Feature: domain Description: Antirestrict Location: 126403-126691 bp Feature: domain Description: Antirestrict Location: 12 6403-12 6691 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, Antirestrict (pfam03230)