myRT

myRT report for GCA_002152995.2_ASM215299v2

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Seq: NGRV02000001.1 Escherichia coli strain BIDMC115 scaffold00001, whole genome shotgun sequence (5041524 bp)
Overview 1 RT 1: 96319-100201 bp 2 RT 2: 1914822-1918804 bp Neighborhood of RT #1 [96319, 100206] rph pyrE RVT-Retrons slmA dut Neighborhood of RT #2 [1914822, 1918830] Asparaginase_2 RVT-GII DcuC Feature: gene Location: 96319-97035 bp Feature: domain Description: rph Location: 96322-97030 bp Feature: domain Description: rph Location: 96322-97030 bp Feature: gene Location: 97086-97742 bp Feature: domain Description: pyrE Location: 97104-97737 bp Feature: domain Description: pyrE Location: 971 04-97737 bp Feature: gene Location: 98040-98999 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 98175-98724 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 981 75-98724 bp Feature: gene Location: 99045-99641 bp Feature: domain Description: slmA Location: 99051-99627 bp Feature: domain Description: slmA Location: 99051 -99627 bp Feature: gene Location: 99748-100206 bp Feature: domain Description: dut Location: 99754-100201 bp Feature: domain Description: dut Location: 99754-1 00201 bp Feature: gene Location: 1914822-1915853 bp Feature: domain Description: Asparaginase_2 Location: 1914912-1915845 bp Feature: domain Description: Asparaginase_2 Location: 1 91 491 2-1 91 5845 bp Feature: gene Location: 1916180-1916329 bp Feature: gene Location: 1916377-1916823 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1916683-1916785 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 91 6683-1 91 6785 bp Feature: gene Location: 1917045-1917416 bp Feature: gene Location: 1917469-1918830 bp Feature: domain Description: DcuC Location: 1917472-1918804 bp Feature: domain Description: DcuC Location: 1 91 7472-1 91 8804 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT rph (PRK00173), pyrE (TIGR00336), RVT-Retrons, slmA (PRK09480), dut (TIGR00576), Asparaginase_2 (pfam01112), RVT-GII, DcuC (TIGR00771)