myRT

myRT report for GCA_002153155.1_ASM215315v1

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Seq: NGTK01000001.1 Klebsiella pneumoniae strain MGH168 scaffold00001, whole genome shotgun sequence (5209200 bp)
Overview 1 RT 1: 3170925-3177607 bp 2 RT 2: 5037529-5045327 bp Neighborhood of RT #1 [3170925, 3177607] COG3440 RVT-Retrons HTH_XRE Neighborhood of RT #2 [5037529, 5045443] AAA_15 AAA_15 RVT-Retrons COG0610 AAA_13 AAA_13 Feature: gene Location: 3170925-3171983 bp Feature: domain Description: COG3440 Location: 3171555-3171942 bp Feature: domain Description: COG3440 Location: 31 71 555-31 71 942 bp Feature: gene Location: 3172182-3176033 bp Feature: gene Location: 3176074-3177045 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3176224-3176791 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 31 76224-31 76791 bp Feature: gene Location: 3177026-3177316 bp Feature: domain Description: HTH_XRE Location: 3177038-3177203 bp Feature: domain Description: HTH_XRE Location: 31 77038-31 77203 bp Feature: gene Location: 3177368-3177607 bp Feature: gene Location: 5037529-5038388 bp Feature: domain Description: AAA_15 Location: 5037532-5037949 bp Feature: domain Description: AAA_1 5 Location: 5037532-5037949 bp Feature: domain Description: AAA_15 Location: 5038090-5038384 bp Feature: domain Description: AAA_1 5 Location: 5038090-5038384 bp Feature: gene Location: 5039015-5039338 bp Feature: gene Location: 5039511-5040611 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 5039652-5040216 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 5039652-504021 6 bp Feature: gene Location: 5041153-5044272 bp Feature: domain Description: COG0610 Location: 5041237-5044249 bp Feature: domain Description: COG061 0 Location: 5041 237-5044249 bp Feature: gene Location: 5044265-5045443 bp Feature: domain Description: AAA_13 Location: 5044358-5044532 bp Feature: domain Description: AAA_1 3 Location: 5044358-5044532 bp Feature: domain Description: AAA_13 Location: 5044754-5045327 bp Feature: domain Description: AAA_1 3 Location: 5044754-5045327 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3440 (Predicted restriction endonuclease ), RVT-Retrons, HTH_XRE (smart00530), AAA_15 (pfam13175), COG0610 (Type I site-specific restriction-modification system, R (restriction) subunit and related helicases ), AAA_13 (pfam13166)