myRT

myRT report for GCA_002153225.1_ASM215322v1

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Seq: NGTN01000002.1 Klebsiella pneumoniae strain MGH181 scaffold00002, whole genome shotgun sequence (1024979 bp)
Overview 1 RT 1: 31835-35242 bp Neighborhood of RT #1 [31835, 35343] Laminin_G_3 RVT-GII PRK10276 PRK10276 Feature: gene Location: 31835-32566 bp Feature: domain Description: Laminin_G_3 Location: 32171-32510 bp Feature: domain Description: Laminin_G_3 Location: 321 71 -3251 0 bp Feature: gene Location: 32563-32772 bp Feature: gene Location: 33222-34709 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 33627-34317 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 33627-3431 7 bp Feature: gene Location: 34787-35026 bp Feature: gene Location: 35026-35343 bp Feature: domain Description: PRK10276 Location: 35032-35146 bp Feature: domain Description: PRK1 0276 Location: 35032-351 46 bp Feature: domain Description: PRK10276 Location: 35173-35242 bp Feature: domain Description: PRK1 0276 Location: 351 73-35242 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Laminin_G_3 (pfam13385), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit)

Seq: NGTN01000001.1 Klebsiella pneumoniae strain MGH181 scaffold00001, whole genome shotgun sequence (3784402 bp)
Overview 1 RT 1: 1227676-1234159 bp Neighborhood of RT #1 [1227676, 1234161] YccC PRK10016 RVT-GII dacD SbcB Feature: gene Location: 1227676-1228734 bp Feature: domain Description: YccC Location: 1227682-1228720 bp Feature: domain Description: YccC Location: 12 2 7682 -12 2 872 0 bp Feature: gene Location: 1228833-1229306 bp Feature: domain Description: PRK10016 Location: 1228836-1229295 bp Feature: domain Description: PRK10016 Location: 12 2 8836-12 2 92 95 bp Feature: gene Location: 1229388-1230875 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1229793-1230483 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12 2 9793-12 30483 bp Feature: gene Location: 1231393-1232556 bp Feature: domain Description: dacD Location: 1231396-1232551 bp Feature: domain Description: dacD Location: 12 31396-12 32 551 bp Feature: gene Location: 1232737-1234161 bp Feature: domain Description: SbcB Location: 1232743-1234159 bp Feature: domain Description: SbcB Location: 12 32 743-12 34159 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YccC (COG1289), PRK10016 (DNA gyrase inhibitor SbmC), RVT-GII, dacD (PRK11397), SbcB (COG2925)

Seq: NGTN01000004.1 Klebsiella pneumoniae strain MGH181 scaffold00004, whole genome shotgun sequence (179835 bp)
Overview 1 RT 1: 173775-178769 bp Neighborhood of RT #1 [173775, 178771] umuC PRK10276 RVT-GII Antirestrict Feature: gene Location: 173775-175046 bp Feature: domain Description: umuC Location: 173778-175041 bp Feature: domain Description: umuC Location: 173 778-175041 bp Feature: gene Location: 175046-175471 bp Feature: domain Description: PRK10276 Location: 175049-175457 bp Feature: domain Description: PRK10276 Location: 175049-175457 bp Feature: gene Location: 175874-177361 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 176279-176969 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 176279-176969 bp Feature: gene Location: 177595-177825 bp Feature: gene Location: 178346-178771 bp Feature: domain Description: Antirestrict Location: 178481-178769 bp Feature: domain Description: Antirestrict Location: 178481-178769 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, Antirestrict (pfam03230)

Seq: NGTN01000005.1 Klebsiella pneumoniae strain MGH181 scaffold00005, whole genome shotgun sequence (79440 bp)
Overview 1 RT 1: 18803-23245 bp Neighborhood of RT #1 [18803, 23247] umuC PRK10276 RVT-GII InsA DDE_Tnp_IS1 Feature: gene Location: 18803-20074 bp Feature: domain Description: umuC Location: 18806-20066 bp Feature: domain Description: umuC Location: 18806-20066 bp Feature: gene Location: 20074-20505 bp Feature: domain Description: PRK10276 Location: 20125-20488 bp Feature: domain Description: PRK10276 Location: 20125-204 88 bp Feature: gene Location: 20911-22398 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21316-22006 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21316-22006 bp Feature: gene Location: 22550-22825 bp Feature: domain Description: InsA Location: 22556-22817 bp Feature: domain Description: InsA Location: 22556-22817 bp Feature: gene Location: 22870-23247 bp Feature: domain Description: DDE_Tnp_IS1 Location: 22873-23245 bp Feature: domain Description: DDE_Tnp_IS1 Location: 22873-2324 5 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, InsA (COG3677), DDE_Tnp_IS1 (pfam03400)