myRT

myRT report for GCA_002153275.1_ASM215327v1

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Seq: NGTL01000002.1 Klebsiella pneumoniae strain MGH171 scaffold00002, whole genome shotgun sequence (2439715 bp)
Overview 1 RT 1: 835592-844210 bp Neighborhood of RT #1 [835592, 844227] YqgA PRK09692 RVT-UG4 FimD FimC Feature: gene Location: 835592-836305 bp Ori: OUH70310.1 Feature: domain Description: YqgA Location: 835598-836300 bp Feature: domain Description: YqgA Location: 835598-836300 bp Feature: gene Location: 837123-837986 bp Ori: OUH70311.1 Feature: domain Description: PRK09692 Location: 837147-837984 bp Feature: domain Description: PRK09692 Location: 8371 47-837984 bp Feature: gene Location: 838744-840825 bp Ori: OUH70312.1 Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 839155-839599 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 8391 55-839599 bp Feature: gene Location: 840822-843416 bp Ori: OUH70313.1 Feature: domain Description: FimD Location: 840864-843405 bp Feature: domain Description: FimD Location: 840864-843405 bp Feature: gene Location: 843463-844227 bp Ori: OUH70314.1 Feature: domain Description: FimC Location: 843508-844210 bp Feature: domain Description: FimC Location: 843508-84421 0 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YqgA (COG1811), PRK09692 (Integrase; provisional), RVT-UG4, FimD (COG3188), FimC (COG3121)

Seq: NGTL01000007.1 Klebsiella pneumoniae strain MGH171 scaffold00007, whole genome shotgun sequence (12355 bp)
Overview 1 RT 1: 5425-9340 bp Neighborhood of RT #1 [5425, 9354] DDE_Tnp_IS1 RVT-GII GIIM PHA02517 InsE Feature: gene Location: 5425-5802 bp Ori: OUH62595.1 Feature: domain Description: DDE_Tnp_IS1 Location: 5428-5800 bp Feature: domain Description: DDE_Tnp_IS1 Location: 542 8-5800 bp Feature: gene Location: 5813-5944 bp Feature: gene Location: 6486-8009 bp Ori: OUH62597.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6759-7491 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6759-7491 bp Feature: domain Description: GIIM Note: maturase Location: 7566-7764 bp Feature: domain Description: GIIM Note: maturase Location: 7566-7764 bp Feature: gene Location: 8601-8840 bp Ori: OUH62598.1 Feature: domain Description: PHA02517 Location: 8604-8775 bp Feature: domain Description: PHA02 517 Location: 8604-8775 bp Feature: gene Location: 9082-9354 bp Ori: OUH62599.1 Feature: domain Description: InsE Location: 9091-9340 bp Feature: domain Description: InsE Location: 9091-9340 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_IS1 (pfam03400), RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed), InsE (COG2963)

Seq: NGTL01000006.1 Klebsiella pneumoniae strain MGH171 scaffold00006, whole genome shotgun sequence (12869 bp)
Overview 1 RT 1: 6600-10187 bp Neighborhood of RT #1 [6600, 10195] RVT-GII PRK10276 umuC Feature: gene Location: 6600-8087 bp Ori: OUH62781.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7005-7695 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7005-7695 bp Feature: gene Location: 8493-8924 bp Ori: OUH62782.1 Feature: domain Description: PRK10276 Location: 8544-8907 bp Feature: domain Description: PRK10276 Location: 8544-8907 bp Feature: gene Location: 8924-10195 bp Ori: OUH62783.1 Feature: domain Description: umuC Location: 8927-10187 bp Feature: domain Description: umuC Location: 8927-10187 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609)