myRT

myRT report for GCA_002153315.1_ASM215331v1

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Seq: NGUB01000001.1 Klebsiella pneumoniae strain UCI117 scaffold00001, whole genome shotgun sequence (5224223 bp)
Overview 1 RT 1: 906192-911797 bp 2 RT 2: 1292911-1298329 bp 3 RT 3: 2672378-2678861 bp Neighborhood of RT #1 [906192, 911823] YbjK int RVT-GII Phage_CI_repr Phage_CI_repr Phage_CI_C Neighborhood of RT #2 [1292911, 1298331] GT9_LPS_heptosyltransferase DinI RVT-GII PRK10276 umuC Neighborhood of RT #3 [2672378, 2678863] YccC PRK10016 RVT-GII dacD SbcB Feature: gene Location: 906192-906755 bp Feature: domain Description: YbjK Location: 906198-906735 bp Feature: domain Description: YbjK Location: 9061 98-906735 bp Feature: gene Location: 906878-907930 bp Feature: domain Description: int Location: 906881-907880 bp Feature: domain Description: int Location: 906881 -907880 bp Feature: gene Location: 908349-909833 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 908751-909441 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 908751 -909441 bp Feature: gene Location: 909932-910876 bp Feature: gene Location: 910888-911823 bp Feature: domain Description: Phage_CI_repr Location: 910972-911155 bp Feature: domain Description: Phage_CI_repr Location: 91 0972-91 1 1 55 bp Feature: domain Description: Phage_CI_repr Location: 911284-911476 bp Feature: domain Description: Phage_CI_repr Location: 91 1 284-91 1 476 bp Feature: domain Description: Phage_CI_C Location: 911503-911797 bp Feature: domain Description: Phage_CI_C Location: 91 1 503-91 1 797 bp Feature: gene Location: 1292911-1294050 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1293094-1293994 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1 293094-1 293994 bp Feature: gene Location: 1294221-1294463 bp Feature: domain Description: DinI Location: 1294272-1294452 bp Feature: domain Description: DinI Location: 1 294272-1 294452 bp Feature: gene Location: 1295081-1296565 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1295483-1296173 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 295483-1 2961 73 bp Feature: gene Location: 1296644-1297063 bp Feature: domain Description: PRK10276 Location: 1296647-1297058 bp Feature: domain Description: PRK1 0276 Location: 1 296647-1 297058 bp Feature: gene Location: 1297066-1298331 bp Feature: domain Description: umuC Location: 1297069-1298329 bp Feature: domain Description: umuC Location: 1 297069-1 298329 bp Feature: gene Location: 2672378-2673436 bp Feature: domain Description: YccC Location: 2672384-2673422 bp Feature: domain Description: YccC Location: 2672384-2673422 bp Feature: gene Location: 2673535-2674008 bp Feature: domain Description: PRK10016 Location: 2673538-2673997 bp Feature: domain Description: PRK1 001 6 Location: 2673538-2673997 bp Feature: gene Location: 2674090-2675574 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2674492-2675182 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2674492-26751 82 bp Feature: gene Location: 2676095-2677258 bp Feature: domain Description: dacD Location: 2676098-2677253 bp Feature: domain Description: dacD Location: 2676098-2677253 bp Feature: gene Location: 2677439-2678863 bp Feature: domain Description: SbcB Location: 2677445-2678861 bp Feature: domain Description: SbcB Location: 2677445-2678861 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YbjK (COG3226), int (PHA02601), RVT-GII, Phage_CI_repr (pfam07022), Phage_CI_C (pfam16452), GT9_LPS_heptosyltransferase (cd03789), DinI (pfam06183), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609), YccC (COG1289)
PRK10016 (DNA gyrase inhibitor SbmC), dacD (PRK11397), SbcB (COG2925)