myRT

myRT report for GCA_002153945.1_ASM215394v1

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Seq: MSAQ01000005.1 Vibrio parahaemolyticus strain Vp37 NODE_5_length_251458_cov_91.0804_ID_3048, whole genome shotgun sequence (251458 bp)
Overview 1 RT 1: 93066-101951 bp Neighborhood of RT #1 [93066, 101959] RMtype1_S_StySKI-TRD2-CR2_like RMtype1_S_StySKI-TRD2-CR2_like COG0610 RVT-UG2 PRK09692 SmpB Feature: gene Location: 93066-94220 bp Ori: OUJ52139.1 Feature: domain Description: RMtype1_S_StySKI-TRD2-CR2_like Location: 93360-93612 bp Feature: domain Description: RMtype1 _S_StySKI-TRD2-CR2_like Location: 93360-9361 2 bp Feature: domain Description: RMtype1_S_StySKI-TRD2-CR2_like Location: 93648-94203 bp Feature: domain Description: RMtype1 _S_StySKI-TRD2-CR2_like Location: 93648-94203 bp Feature: gene Location: 94228-97290 bp Ori: OUJ52140.1 Feature: domain Description: COG0610 Location: 94237-96460 bp Feature: domain Description: COG061 0 Location: 94237-96460 bp Feature: gene Location: 97347-99002 bp Ori: OUJ52141.1 Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 97722-98703 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 97722-98703 bp Feature: gene Location: 99628-100872 bp Ori: OUJ52142.1 Feature: domain Description: PRK09692 Location: 99631-100864 bp Feature: domain Description: PRK09692 Location: 99631 -1 00864 bp Feature: gene Location: 101474-101959 bp Ori: OUJ52143.1 Feature: domain Description: SmpB Location: 101504-101951 bp Feature: domain Description: SmpB Location: 1 01 504-1 01 951 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RMtype1_S_StySKI-TRD2-CR2_like (cd17259), COG0610 (Type I site-specific restriction-modification system, R (restriction) subunit and related helicases ), RVT-UG2, PRK09692 (Integrase; provisional), SmpB (pfam01668)