myRT

myRT report for GCA_002155185.1_ASM215518v1

Download annotations/find similar RTs

Seq: MTAX01000076.1 Nostoc sp. RF31YmG NODE_355_length_113425_cov_33.934830, whole genome shotgun sequence (113481 bp)
Overview 1 RT 1: 35783-40258 bp Neighborhood of RT #1 [35783, 40389] YfmG Avd_like RVT-DGRs PHA02518 nucleoid_noc nucleoid_noc Feature: gene Location: 35783-36622 bp Feature: domain Description: YfmG Location: 35819-36602 bp Feature: domain Description: YfmG Location: 3581 9-36602 bp Feature: gene Location: 36836-37180 bp Feature: domain Description: Avd_like Location: 36854-37160 bp Feature: domain Description: Avd_like Location: 36854-371 60 bp Feature: gene Location: 37201-38259 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 37411-38053 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 3741 1 -38053 bp Feature: gene Location: 38829-39470 bp Feature: domain Description: PHA02518 Location: 38832-39456 bp Feature: domain Description: PHA0251 8 Location: 38832-39456 bp Feature: gene Location: 39457-40389 bp Feature: domain Description: nucleoid_noc Location: 39532-39853 bp Feature: domain Description: nucleoid_noc Location: 39532-39853 bp Feature: domain Description: nucleoid_noc Location: 39991-40258 bp Feature: domain Description: nucleoid_noc Location: 39991 -40258 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YfmG (COG1262), Avd_like (cd16376), RVT-DGRs, PHA02518 (ParA-like protein; Provisional), nucleoid_noc (TIGR04285)

Seq: MTAX01000029.1 Nostoc sp. RF31YmG NODE_320_length_957_cov_107.878784, whole genome shotgun sequence (1013 bp)
Overview 1 RT 1: 600-1014 bp Neighborhood of RT #1 [600, 1013] RVT_N RVT-GII Feature: gene Location: 600-1013 bp Feature: RT Description: RVT_N Location: 642-888 bp Feature: RT Description: RVT_N Location: 642 -888 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 930-1014 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 930-1014 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII

Seq: MTAX01000089.1 Nostoc sp. RF31YmG NODE_611_length_580028_cov_15.888417, whole genome shotgun sequence (580084 bp)
Overview 1 RT 1: 489053-492312 bp Neighborhood of RT #1 [489053, 492362] HyaA RVT_N RVT-GII COG3415 Feature: gene Location: 489053-489929 bp Feature: domain Description: HyaA Location: 489059-489869 bp Feature: domain Description: HyaA Location: 489059-489869 bp Feature: gene Location: 490254-490439 bp Feature: gene Location: 490730-491125 bp Feature: RT Description: RVT_N Location: 490760-490994 bp Feature: RT Description: RVT_N Location: 490760-490994 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 491057-491123 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 491057-491123 bp Feature: gene Location: 491337-491862 bp Feature: gene Location: 491871-492362 bp Feature: domain Description: COG3415 Location: 491916-492312 bp Feature: domain Description: COG3 415 Location: 491916-4923 12 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HyaA (COG1740), RVT_N (pfam13655), RVT-GII, COG3415 (Transposase )