myRT

myRT report for GCA_002155385.1_ASM215538v1

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Seq: MUKE01000016.1 Escherichia coli strain AUH_IMP199 NODE_16_length_102112_cov_52.0917_ID_4143, whole genome shotgun sequence (102112 bp)
Overview 1 RT 1: 15451-18991 bp Neighborhood of RT #1 [15451, 18993] COG4584 COG4584 IstB_IS21_ATP IstB_IS21 RVT-GII GIIM DDE_Tnp_IS66_C Dps Feature: gene Location: 15451-16512 bp Feature: domain Description: COG4584 Location: 15457-15850 bp Feature: domain Description: COG4584 Location: 1 5457-1 5850 bp Feature: domain Description: COG4584 Location: 15964-16378 bp Feature: domain Description: COG4584 Location: 1 5964-1 6378 bp Feature: gene Location: 16529-17284 bp Feature: domain Description: IstB_IS21_ATP Location: 16601-16685 bp Feature: domain Description: IstB_IS21 _ATP Location: 1 6601 -1 6685 bp Feature: domain Description: IstB_IS21 Location: 16694-17219 bp Feature: domain Description: IstB_IS21 Location: 1 6694-1 721 9 bp Feature: gene Location: 17426-18475 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17444-18098 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 7444-1 8098 bp Feature: domain Description: GIIM Note: maturase Location: 18176-18401 bp Feature: domain Description: GIIM Note: maturase Location: 1 81 76-1 8401 bp Feature: gene Location: 18591-18737 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 18603-18714 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 1 8603-1 871 4 bp Feature: gene Location: 18829-18993 bp Feature: domain Description: Dps Location: 18832-18991 bp Feature: domain Description: Dps Location: 1 8832-1 8991 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG4584 (Transposase ), IstB_IS21_ATP (pfam08483), IstB_IS21 (pfam01695), RVT-GII, GIIM (pfam08388), DDE_Tnp_IS66_C (pfam13817), Dps (COG0783)

Seq: MUKE01000002.1 Escherichia coli strain AUH_IMP199 NODE_2_length_520912_cov_46.0712_ID_4115, whole genome shotgun sequence (520912 bp)
Overview 1 RT 1: 61852-69553 bp Neighborhood of RT #1 [61852, 69690] proA RVT-UG5 nitrilase AbiEi_3_N AbiEi_3 AbiEii Feature: gene Location: 61852-63105 bp Feature: domain Description: proA Location: 61879-63070 bp Feature: domain Description: proA Location: 61879-63070 bp Feature: gene Location: 63659-64129 bp Feature: gene Location: 64476-67685 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 65004-65493 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 65004-65493 bp Feature: domain Description: nitrilase Location: 66999-67596 bp Feature: domain Description: nitrilase Location: 66999-67596 bp Feature: gene Location: 67980-68783 bp Feature: domain Description: AbiEi_3_N Location: 68013-68274 bp Feature: domain Description: AbiEi_3_N Location: 68013-682 74 bp Feature: domain Description: AbiEi_3 Location: 68286-68742 bp Feature: domain Description: AbiEi_3 Location: 682 86-68742 bp Feature: gene Location: 68770-69690 bp Feature: domain Description: AbiEii Location: 68812-69553 bp Feature: domain Description: AbiEii Location: 68812 -69553 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT proA (TIGR00407), RVT-UG5, nitrilase (cl11424), AbiEi_3_N (pfam17194), AbiEi_3 (pfam11459), AbiEii (pfam08843)

Seq: MUKE01000051.1 Escherichia coli strain AUH_IMP199 NODE_51_length_2272_cov_105.305_ID_4213, whole genome shotgun sequence (2272 bp)
Overview 1 RT 1: 93-2269 bp Neighborhood of RT #1 [93, 2269] RVT-GII GIIM Feature: gene Location: 93-1616 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 366-1098 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 66-1098 bp Feature: domain Description: GIIM Note: maturase Location: 1173-1371 bp Feature: domain Description: GIIM Note: maturase Location: 1173 -13 71 bp Feature: gene Location: 1910-2269 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: MUKE01000008.1 Escherichia coli strain AUH_IMP199 NODE_8_length_198307_cov_55.9668_ID_4127, whole genome shotgun sequence (198307 bp)
Overview 1 RT 1: 188775-194112 bp Neighborhood of RT #1 [188775, 194120] PFLE_PFLC RVT-GII RVT-GII GIIM YesM Feature: gene Location: 188775-189692 bp Feature: domain Description: PFLE_PFLC Location: 188811-189666 bp Feature: domain Description: PFLE_PFLC Location: 188811-189666 bp Feature: gene Location: 189829-190734 bp Feature: gene Location: 191220-191759 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 191550-191628 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 191550-191628 bp Feature: gene Location: 191787-192308 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 191793-192075 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 191793-192075 bp Feature: domain Description: GIIM Note: maturase Location: 192123-192303 bp Feature: domain Description: GIIM Note: maturase Location: 192123-192303 bp Feature: gene Location: 192630-192818 bp Feature: gene Location: 192858-194120 bp Feature: domain Description: YesM Location: 193371-194112 bp Feature: domain Description: YesM Location: 193371-194 112 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PFLE_PFLC (TIGR02494), RVT-GII, GIIM (pfam08388), YesM (COG2972)