myRT

myRT report for GCA_002155645.1_ASM215564v1

Download annotations/find similar RTs

Seq: MUJI01000012.1 Escherichia coli strain AUH_IMP605 NODE_12_length_121724_cov_23.7642_ID_6585, whole genome shotgun sequence (121724 bp)
Overview 1 RT 1: 107811-114585 bp Neighborhood of RT #1 [107811, 114587] SLATT_5 RVT-UG17 phage_tail_N Peptidase_S74 Ail_Lom Feature: gene Location: 107811-107951 bp Feature: gene Location: 107964-108515 bp Feature: domain Description: SLATT_5 Location: 107970-108486 bp Feature: domain Description: SLATT_5 Location: 1 07970-1 08486 bp Feature: gene Location: 108493-109863 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 108721-109327 bp Feature: RT Description: RVT-UG1 7 Note: UG1 7 RT Location: 1 08721 -1 09327 bp Feature: gene Location: 110159-113923 bp Feature: domain Description: phage_tail_N Location: 110162-110561 bp Feature: domain Description: phage_tail_N Location: 1 1 01 62-1 1 0561 bp Feature: domain Description: Peptidase_S74 Location: 113492-113639 bp Feature: domain Description: Peptidase_S74 Location: 1 1 3492-1 1 3639 bp Feature: gene Location: 113988-114587 bp Feature: domain Description: Ail_Lom Location: 113991-114585 bp Feature: domain Description: Ail_Lom Location: 1 1 3991 -1 1 4585 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SLATT_5 (pfam18160), RVT-UG17, phage_tail_N (pfam08400), Peptidase_S74 (pfam13884), Ail_Lom (pfam06316)

Seq: MUJI01000079.1 Escherichia coli strain AUH_IMP605 NODE_79_length_2663_cov_83.7484_ID_6719, whole genome shotgun sequence (2663 bp)
Overview 1 RT 1: 149-1955 bp Neighborhood of RT #1 [149, 2050] RVT-GII Intron_maturas2 HNHc Feature: gene Location: 149-2050 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 416-1247 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 416-12 47 bp Feature: domain Description: Intron_maturas2 Location: 1361-1619 bp Feature: domain Description: Intron_maturas2 Location: 1361-1619 bp Feature: domain Description: HNHc Note: nucleases Location: 1793-1955 bp Feature: domain Description: HNHc Note: nucleases Location: 1793-1955 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: MUJI01000084.1 Escherichia coli strain AUH_IMP605 NODE_84_length_2272_cov_48.483_ID_6729, whole genome shotgun sequence (2272 bp)
Overview 1 RT 1: 1-1935 bp Neighborhood of RT #1 [1, 2180] RVT-GII GIIM Feature: gene Location: 1-363 bp Feature: gene Location: 657-2180 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 930-1662 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 93 0-1662 bp Feature: domain Description: GIIM Note: maturase Location: 1737-1935 bp Feature: domain Description: GIIM Note: maturase Location: 173 7-193 5 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)