myRT

myRT report for GCA_002156335.1_ASM215633v1

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Seq: MWLU01000020.1 Salmonella enterica subsp. enterica serovar Oranienburg strain NCTC 1710 NODE_20_length_67299_cov_20.6409_ID_5941, whole genome shotgun sequence (67299 bp)
Overview 1 RT 1: 45883-50158 bp Neighborhood of RT #1 [45883, 50158] PRK10473 RVT-Retrons Feature: gene Location: 45883-47070 bp Feature: domain Description: PRK10473 Location: 45886-47062 bp Feature: domain Description: PRK1 0473 Location: 45886-47062 bp Feature: gene Location: 47415-47624 bp Feature: gene Location: 47971-48906 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 48082-48667 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 48082-48667 bp Feature: gene Location: 48906-49868 bp Feature: gene Location: 49895-50158 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10473 (MdtL family multidrug efflux MFS transporter), RVT-Retrons

Seq: MWLU01000022.1 Salmonella enterica subsp. enterica serovar Oranienburg strain NCTC 1710 NODE_22_length_64518_cov_17.2827_ID_5945, whole genome shotgun sequence (64518 bp)
Overview 1 RT 1: 13717-18672 bp Neighborhood of RT #1 [13717, 18672] groEL RVT_N RVT-GII GIIM HNHc Feature: gene Location: 13717-15363 bp Feature: domain Description: groEL Location: 13723-15349 bp Feature: domain Description: groEL Location: 1372 3-15349 bp Feature: gene Location: 15704-16030 bp Feature: gene Location: 16462-18159 bp Feature: RT Description: RVT_N Location: 16525-16759 bp Feature: RT Description: RVT_N Location: 1652 5-16759 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16813-17458 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16813-17458 bp Feature: domain Description: GIIM Note: maturase Location: 17512-17743 bp Feature: domain Description: GIIM Note: maturase Location: 17512 -17743 bp Feature: domain Description: HNHc Note: nucleases Location: 17953-18109 bp Feature: domain Description: HNHc Note: nucleases Location: 17953-18109 bp Feature: gene Location: 18164-18487 bp Feature: gene Location: 18538-18672 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT groEL (PRK12852), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507)