myRT

myRT report for GCA_002156345.1_ASM215634v1

Download annotations/find similar RTs

Seq: MWLX01000229.1 Salmonella enterica subsp. enterica serovar Daytona strain NCTC 7102 NODE_229_length_810_cov_1.80381_ID_8982, whole genome shotgun sequence (810 bp)
Overview 1 RT 1: 169-583 bp Neighborhood of RT #1 [169, 807] RVT-GII GIIM Feature: gene Location: 169-807 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 175-289 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 75-289 bp Feature: domain Description: GIIM Note: maturase Location: 364-583 bp Feature: domain Description: GIIM Note: maturase Location: 364-583 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: MWLX01000034.1 Salmonella enterica subsp. enterica serovar Daytona strain NCTC 7102 NODE_34_length_40117_cov_13.9831_ID_8580, whole genome shotgun sequence (40117 bp)
Overview 1 RT 1: 873-5045 bp Neighborhood of RT #1 [873, 5065] Tra5 TIR-like RVT-Retrons PHA02517 Feature: gene Location: 873-1496 bp Feature: domain Description: Tra5 Location: 894-1455 bp Feature: domain Description: Tra5 Location: 894-1455 bp Feature: gene Location: 1776-2612 bp Feature: domain Description: TIR-like Location: 2202-2535 bp Feature: domain Description: TIR-like Location: 2 2 02 -2 535 bp Feature: gene Location: 2641-3600 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2821-3343 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2 82 1-3343 bp Feature: gene Location: 3631-3858 bp Feature: gene Location: 4226-5065 bp Feature: domain Description: PHA02517 Location: 4250-5045 bp Feature: domain Description: PHA02 517 Location: 42 50-5045 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Tra5 (COG2801), TIR-like (pfam10137), RVT-Retrons, PHA02517 (putative transposase OrfB; Reviewed)

Seq: MWLX01000358.1 Salmonella enterica subsp. enterica serovar Daytona strain NCTC 7102 NODE_358_length_496_cov_0.859079_ID_9228, whole genome shotgun sequence (496 bp)
Overview 1 RT 1: 3-384 bp Neighborhood of RT #1 [3, 494] RVT-GII Feature: gene Location: 3-494 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9-384 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9-3 84 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII