myRT

myRT report for GCA_002156885.1_ASM215688v1

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Seq: NCWQ01000079.1 Flavobacterium sp. AJR contig079, whole genome shotgun sequence (19776 bp)
Overview 1 RT 1: 1-3701 bp Neighborhood of RT #1 [1, 3701] RVT-UG2 Feature: gene Location: 1-1224 bp Ori: OUL60726.1 Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 262-1225 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 262-1 225 bp Feature: gene Location: 1650-2984 bp Feature: gene Location: 3306-3701 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG2

Seq: NCWQ01000006.1 Flavobacterium sp. AJR contig006, whole genome shotgun sequence (69373 bp)
Overview 1 RT 1: 51461-56239 bp Neighborhood of RT #1 [51461, 56250] TPR TPR_17 Acetyltransf_7 RVT-UG2 AraC PRK09818 Feature: gene Location: 51461-52105 bp Ori: OUL63902.1 Feature: domain Description: TPR Location: 51647-51932 bp Feature: domain Description: TPR Location: 51647-51932 bp Feature: domain Description: TPR_17 Location: 51944-52019 bp Feature: domain Description: TPR_17 Location: 51944-52 019 bp Feature: gene Location: 52136-52585 bp Ori: OUL63903.1 Feature: domain Description: Acetyltransf_7 Location: 52313-52523 bp Feature: domain Description: Acetyltransf_7 Location: 52 313-52 52 3 bp Feature: gene Location: 53122-54633 bp Ori: OUL63904.1 Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 53356-54265 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 53356-542 65 bp Feature: gene Location: 54765-55601 bp Ori: OUL63905.1 Feature: domain Description: AraC Location: 55290-55590 bp Feature: domain Description: AraC Location: 552 90-55590 bp Feature: gene Location: 55693-56250 bp Ori: OUL63906.1 Feature: domain Description: PRK09818 Location: 55723-56239 bp Feature: domain Description: PRK09818 Location: 5572 3-562 39 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TPR (smart00028), TPR_17 (pfam13431), Acetyltransf_7 (pfam13508), RVT-UG2, AraC (COG2207), PRK09818 (kinase inhibitor)

Seq: NCWQ01000010.1 Flavobacterium sp. AJR contig010, whole genome shotgun sequence (82319 bp)
Overview 1 RT 1: 69490-79232 bp Neighborhood of RT #1 [69490, 79393] VL_LC_FACS_like pro_imino_pep_2 RVT-Retrons WGR_DNA_ligase HEAT_2 PBP2_AA_hypothetical Feature: gene Location: 69490-71265 bp Ori: OUL63661.1 Feature: domain Description: VL_LC_FACS_like Location: 69580-71221 bp Feature: domain Description: VL_LC_FACS_like Location: 69580-71221 bp Feature: gene Location: 71497-72546 bp Ori: OUL63667.1 Feature: domain Description: pro_imino_pep_2 Location: 71647-72514 bp Feature: domain Description: pro_imino_pep_2 Location: 71647-72514 bp Feature: gene Location: 72872-74386 bp Ori: OUL63662.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 73415-74030 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 73 415-7403 0 bp Feature: gene Location: 74405-77743 bp Ori: OUL63663.1 Feature: domain Description: WGR_DNA_ligase Location: 74420-74639 bp Feature: domain Description: WGR_DNA_ligase Location: 74420-7463 9 bp Feature: domain Description: HEAT_2 Location: 74774-74981 bp Feature: domain Description: HEAT_2 Location: 74774-74981 bp Feature: gene Location: 77747-79393 bp Ori: OUL63664.1 Feature: domain Description: PBP2_AA_hypothetical Location: 78965-79232 bp Feature: domain Description: PBP2_AA_hypothetical Location: 78965-7923 2 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT VL_LC_FACS_like (cd05907), pro_imino_pep_2 (TIGR01250), RVT-Retrons, WGR_DNA_ligase (cd07998), HEAT_2 (pfam13646), PBP2_AA_hypothetical (cd13623)