myRT

myRT report for GCA_002157345.1_ASM215734v1

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Seq: NGJM01000077.1 Klebsiella pneumoniae strain ICBKpBL-III-02(1) KPBLIII03-1_S4_L001_R1_001contig_78, whole genome shotgun sequence (13937 bp)
Overview 1 RT 1: 6008-9753 bp Neighborhood of RT #1 [6008, 9755] PRK10276 RVT-GII Antirestrict Feature: gene Location: 6008-6433 bp Ori: OUM14079.1 Feature: domain Description: PRK10276 Location: 6011-6419 bp Feature: domain Description: PRK1 0276 Location: 601 1 -641 9 bp Feature: gene Location: 6587-6838 bp Feature: gene Location: 6838-8346 bp Ori: OUM14081.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7240-7954 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7240-7954 bp Feature: gene Location: 8580-8810 bp Feature: gene Location: 9330-9755 bp Ori: OUM14082.1 Feature: domain Description: Antirestrict Location: 9465-9753 bp Feature: domain Description: Antirestrict Location: 9465-9753 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, Antirestrict (pfam03230)

Seq: NGJM01000009.1 Klebsiella pneumoniae strain ICBKpBL-III-02(1) KPBLIII03-1_S4_L001_R1_001contig_9, whole genome shotgun sequence (294977 bp)
Overview 1 RT 1: 255974-263322 bp Neighborhood of RT #1 [255974, 263372] FimC FimD RVT-UG4 Integrase_1 PRK09692 Feature: gene Location: 255974-256738 bp Ori: OUM18373.1 Feature: domain Description: FimC Location: 256019-256721 bp Feature: domain Description: FimC Location: 2 56019-2 5672 1 bp Feature: gene Location: 256785-259379 bp Ori: OUM18374.1 Feature: domain Description: FimD Location: 256827-259368 bp Feature: domain Description: FimD Location: 2 5682 7-2 59368 bp Feature: gene Location: 259376-261457 bp Ori: OUM18375.1 Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 259787-260231 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 2 59787-2 602 31 bp Feature: gene Location: 261448-261907 bp Feature: domain Description: Integrase_1 Location: 261469-261736 bp Feature: domain Description: Integrase_1 Location: 2 61469-2 61736 bp Feature: gene Location: 262134-263372 bp Feature: domain Description: PRK09692 Location: 262140-263322 bp Feature: domain Description: PRK09692 Location: 2 62 140-2 6332 2 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FimC (COG3121), FimD (COG3188), RVT-UG4, Integrase_1 (pfam12835), PRK09692 (Integrase; provisional)