myRT

myRT report for GCA_002157515.1_ASM215751v1

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Seq: NFSB01000045.1 Pseudomonas putida strain 1312 Contig45, whole genome shotgun sequence (30973 bp)
Overview 1 RT 1: 27097-30179 bp Neighborhood of RT #1 [27097, 30628] COG3183 RVT-G2L4 Feature: gene Location: 27097-28029 bp Ori: OUM38533.1 Feature: domain Description: COG3183 Location: 27706-28009 bp Feature: domain Description: COG31 83 Location: 27706-28009 bp Feature: gene Location: 28079-28363 bp Feature: gene Location: 29375-30628 bp Ori: OUM38535.1 Feature: RT Description: RVT-G2L4 Note: G2L4 RT Location: 29594-30179 bp Feature: RT Description: RVT-G2L4 Note: G2L4 RT Location: 29594-301 79 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3183 (Predicted restriction endonuclease, HNH family ), RVT-G2L4

Seq: NFSB01000048.1 Pseudomonas putida strain 1312 Contig48, whole genome shotgun sequence (48281 bp)
Overview 1 RT 1: 39474-43507 bp Neighborhood of RT #1 [39474, 43507] ArdC RVT-GII GIIM MvaT_DBD Feature: gene Location: 39474-39788 bp Feature: gene Location: 39876-40814 bp Ori: OUM38273.1 Feature: domain Description: ArdC Location: 39882-40791 bp Feature: domain Description: ArdC Location: 39882 -40791 bp Feature: gene Location: 40896-42317 bp Ori: OUM38274.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 41253-41868 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 412 53-41868 bp Feature: domain Description: GIIM Note: maturase Location: 41925-42150 bp Feature: domain Description: GIIM Note: maturase Location: 4192 5-42 150 bp Feature: gene Location: 42822-43187 bp Ori: OUM38275.1 Feature: domain Description: MvaT_DBD Location: 43062-43185 bp Feature: domain Description: MvaT_DBD Location: 43062 -43185 bp Feature: gene Location: 43313-43507 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ArdC (COG4227), RVT-GII, GIIM (pfam08388), MvaT_DBD (cl40688)