myRT

myRT report for GCA_002158215.1_ASM215821v1

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Seq: MSIB01000019.1 Enterococcus faecium strain IHC11 IHC11_contig_19_consensus_1, whole genome shotgun sequence (20291 bp)
Overview 1 RT 1: 9436-17038 bp Neighborhood of RT #1 [9436, 17043] RelB_DinJ FtsK_SpoIIIE RVT-GII RVT-GII HNHc Zeta_toxin Feature: gene Location: 9436-9780 bp Ori: OUK37847.1 Feature: domain Description: RelB_DinJ Location: 9649-9772 bp Feature: domain Description: RelB_DinJ Location: 9649-9772 bp Feature: gene Location: 9863-10879 bp Ori: OUK37848.1 Feature: domain Description: FtsK_SpoIIIE Location: 10514-10760 bp Feature: domain Description: FtsK_SpoIIIE Location: 1 051 4-1 0760 bp Feature: gene Location: 11530-13346 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11839-12538 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 839-1 2538 bp Feature: gene Location: 13972-14202 bp Feature: gene Location: 14321-16180 bp Ori: OUK37850.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14630-15371 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 4630-1 5371 bp Feature: domain Description: HNHc Note: nucleases Location: 15926-16064 bp Feature: domain Description: HNHc Note: nucleases Location: 1 5926-1 6064 bp Feature: gene Location: 16274-16516 bp Feature: gene Location: 16603-17043 bp Ori: OUK37852.1 Feature: domain Description: Zeta_toxin Location: 16681-17038 bp Feature: domain Description: Zeta_toxin Location: 1 6681 -1 7038 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RelB_DinJ (TIGR02384), FtsK_SpoIIIE (pfam01580), RVT-GII, HNHc (smart00507), Zeta_toxin (pfam06414)

Seq: MSIB01000133.1 Enterococcus faecium strain IHC11 IHC11_contig_133_consensus_1, whole genome shotgun sequence (3260 bp)
Overview 1 RT 1: 1-2530 bp Neighborhood of RT #1 [1, 3192] HsdM RVT-AbiP2 Feature: gene Location: 1-1466 bp Ori: OUK33960.1 Feature: domain Description: HsdM Location: 22-1447 bp Feature: domain Description: HsdM Location: 2 2 -1447 bp Feature: gene Location: 1804-3192 bp Ori: OUK33961.1 Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 2065-2530 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 2 065-2 530 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HsdM (COG0286), RVT-AbiP2

Seq: MSIB01000018.1 Enterococcus faecium strain IHC11 IHC11_contig_18_consensus_1, whole genome shotgun sequence (33732 bp)
Overview 1 RT 1: 19208-30122 bp Neighborhood of RT #1 [19208, 30136] RelB_DinJ FtsK_SpoIIIE RVT-GII HNHc FtsK Dcm HTH_XRE Rol_Rep_N Rep_trans DUF3789 RVT-GII HNHc ArdA Feature: gene Location: 19208-19561 bp Ori: OUK37896.1 Feature: domain Description: RelB_DinJ Location: 19427-19553 bp Feature: domain Description: RelB_DinJ Location: 19427-19553 bp Feature: gene Location: 19630-20646 bp Ori: OUK37897.1 Feature: domain Description: FtsK_SpoIIIE Location: 20287-20527 bp Feature: domain Description: FtsK_SpoIIIE Location: 20287-20527 bp Feature: gene Location: 21297-23114 bp Ori: OUK37909.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21606-22302 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21606-223 02 bp Feature: domain Description: HNHc Note: nucleases Location: 22842-23001 bp Feature: domain Description: HNHc Note: nucleases Location: 22842-23 001 bp Feature: gene Location: 23216-23596 bp Ori: OUK37898.1 Feature: domain Description: FtsK Location: 23231-23471 bp Feature: domain Description: FtsK Location: 23 23 1-23 471 bp Feature: gene Location: 23641-24783 bp Ori: OUK37899.1 Feature: domain Description: Dcm Location: 23644-24757 bp Feature: domain Description: Dcm Location: 23 644-24757 bp Feature: gene Location: 25318-26502 bp Ori: OUK37900.1 Feature: domain Description: HTH_XRE Location: 25348-25492 bp Feature: domain Description: HTH_XRE Location: 253 48-25492 bp Feature: domain Description: Rol_Rep_N Location: 25525-25789 bp Feature: domain Description: Rol_Rep_N Location: 25525-25789 bp Feature: domain Description: Rep_trans Location: 25813-26425 bp Feature: domain Description: Rep_trans Location: 25813 -26425 bp Feature: gene Location: 26499-26612 bp Ori: OUK37901.1 Feature: domain Description: DUF3789 Location: 26526-26610 bp Feature: domain Description: DUF3 789 Location: 26526-26610 bp Feature: gene Location: 27382-29292 bp Ori: OUK37902.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 27715-28453 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 27715-28453 bp Feature: domain Description: HNHc Note: nucleases Location: 29008-29173 bp Feature: domain Description: HNHc Note: nucleases Location: 29008-29173 bp Feature: gene Location: 29417-29620 bp Feature: gene Location: 29633-30136 bp Ori: OUK37904.1 Feature: domain Description: ArdA Location: 29651-30122 bp Feature: domain Description: ArdA Location: 29651-3 0122 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RelB_DinJ (TIGR02384), FtsK_SpoIIIE (pfam01580), RVT-GII, HNHc (smart00507), FtsK (COG1674), Dcm (COG0270), HTH_XRE (smart00530), Rol_Rep_N (pfam18106), Rep_trans (pfam02486), DUF3789 (pfam12664)
ArdA (pfam07275)