myRT

myRT report for GCA_002158245.1_ASM215824v1

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Seq: MSID01000040.1 Enterococcus faecium strain IHC13 IHC13_contig_40_consensus_1, whole genome shotgun sequence (31093 bp)
Overview 1 RT 1: 19327-24876 bp Neighborhood of RT #1 [19327, 24902] RelB_DinJ FtsK_SpoIIIE RVT-GII HNHc FtsK Dcm Feature: gene Location: 19327-19680 bp Ori: OUK43708.1 Feature: domain Description: RelB_DinJ Location: 19546-19672 bp Feature: domain Description: RelB_DinJ Location: 1 9546-1 9672 bp Feature: gene Location: 19749-20765 bp Ori: OUK43709.1 Feature: domain Description: FtsK_SpoIIIE Location: 20406-20646 bp Feature: domain Description: FtsK_SpoIIIE Location: 20406-20646 bp Feature: gene Location: 21416-23233 bp Ori: OUK43720.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21725-22421 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21 725-22421 bp Feature: domain Description: HNHc Note: nucleases Location: 22961-23120 bp Feature: domain Description: HNHc Note: nucleases Location: 22961 -231 20 bp Feature: gene Location: 23335-23715 bp Ori: OUK43710.1 Feature: domain Description: FtsK Location: 23350-23590 bp Feature: domain Description: FtsK Location: 23350-23590 bp Feature: gene Location: 23760-24902 bp Ori: OUK43711.1 Feature: domain Description: Dcm Location: 23763-24876 bp Feature: domain Description: Dcm Location: 23763-24876 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RelB_DinJ (TIGR02384), FtsK_SpoIIIE (pfam01580), RVT-GII, HNHc (smart00507), FtsK (COG1674), Dcm (COG0270)

Seq: MSID01000140.1 Enterococcus faecium strain IHC13 IHC13_contig_140_consensus_1, whole genome shotgun sequence (3408 bp)
Overview 1 RT 1: 1-3408 bp Neighborhood of RT #1 [1, 3408] HsdM RVT-AbiP2 Feature: gene Location: 1-1463 bp Ori: OUK40764.1 Feature: domain Description: HsdM Location: 22-1447 bp Feature: domain Description: HsdM Location: 2 2 -1447 bp Feature: gene Location: 1801-3189 bp Ori: OUK40766.1 Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 2062-2527 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 2 062 -2 52 7 bp Feature: gene Location: 3254-3408 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HsdM (COG0286), RVT-AbiP2

Seq: MSID01000111.1 Enterococcus faecium strain IHC13 IHC13_contig_111_consensus_1, whole genome shotgun sequence (32067 bp)
Overview 1 RT 1: 4-5334 bp Neighborhood of RT #1 [4, 5405] AAA_10 RVT-GII AAA_10 TcpE Feature: gene Location: 4-822 bp Ori: OUK41333.1 Feature: domain Description: AAA_10 Location: 7-808 bp Feature: domain Description: AAA_10 Location: 7-808 bp Feature: gene Location: 850-933 bp Feature: gene Location: 956-2782 bp Ori: OUK41334.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1256-1955 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1256-1955 bp Feature: gene Location: 3479-5029 bp Ori: OUK41335.1 Feature: domain Description: AAA_10 Location: 4808-4991 bp Feature: domain Description: AAA_10 Location: 4808-4991 bp Feature: gene Location: 5016-5405 bp Ori: OUK41336.1 Feature: domain Description: TcpE Location: 5034-5334 bp Feature: domain Description: TcpE Location: 503 4-53 3 4 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AAA_10 (pfam12846), RVT-GII, TcpE (pfam12648)