myRT

myRT report for GCA_002158355.1_ASM215835v1

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Seq: KZ153775.1 Enterococcus faecium strain IHC8 genomic scaffold IHC8_contig_56_consensus, whole genome shotgun sequence (2747 bp)
Overview 1 RT 1: 132-2429 bp Neighborhood of RT #1 [132, 2429] RVT-GII HNHc Feature: gene Location: 132-2009 bp Ori: OUK29467.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 447-1185 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 447-1 1 85 bp Feature: domain Description: HNHc Note: nucleases Location: 1743-1896 bp Feature: domain Description: HNHc Note: nucleases Location: 1 743-1 896 bp Feature: gene Location: 2196-2429 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507)

Seq: KZ153739.1 Enterococcus faecium strain IHC8 genomic scaffold IHC8_contig_20_consensus, whole genome shotgun sequence (30953 bp)
Overview 1 RT 1: 6192-11759 bp Neighborhood of RT #1 [6192, 11767] Dcm FtsK RVT-GII HNHc FtsK_SpoIIIE RelB_DinJ Feature: gene Location: 6192-7334 bp Ori: OUK30838.1 Feature: domain Description: Dcm Location: 6195-7308 bp Feature: domain Description: Dcm Location: 6195-7308 bp Feature: gene Location: 7379-7759 bp Ori: OUK30839.1 Feature: domain Description: FtsK Location: 7394-7634 bp Feature: domain Description: FtsK Location: 7394-7634 bp Feature: gene Location: 7861-9678 bp Ori: OUK30859.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8170-8866 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8170-8866 bp Feature: domain Description: HNHc Note: nucleases Location: 9406-9565 bp Feature: domain Description: HNHc Note: nucleases Location: 9406-9565 bp Feature: gene Location: 10329-11345 bp Ori: OUK30840.1 Feature: domain Description: FtsK_SpoIIIE Location: 10986-11226 bp Feature: domain Description: FtsK_SpoIIIE Location: 10986-112 2 6 bp Feature: gene Location: 11414-11767 bp Ori: OUK30841.1 Feature: domain Description: RelB_DinJ Location: 11633-11759 bp Feature: domain Description: RelB_DinJ Location: 11633-11759 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Dcm (COG0270), FtsK (COG1674), RVT-GII, HNHc (smart00507), FtsK_SpoIIIE (pfam01580), RelB_DinJ (TIGR02384)

Seq: KZ153725.1 Enterococcus faecium strain IHC8 genomic scaffold IHC8_contig_6_consensus, whole genome shotgun sequence (32089 bp)
Overview 1 RT 1: 26685-32072 bp Neighborhood of RT #1 [26685, 32086] TcpE AAA_10 RVT-GII AAA_10 Feature: gene Location: 26685-27074 bp Ori: OUK31724.1 Feature: domain Description: TcpE Location: 26703-27003 bp Feature: domain Description: TcpE Location: 26703 -27003 bp Feature: gene Location: 27061-28611 bp Ori: OUK31725.1 Feature: domain Description: AAA_10 Location: 28390-28573 bp Feature: domain Description: AAA_10 Location: 283 90-28573 bp Feature: gene Location: 29308-31134 bp Ori: OUK31726.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 29608-30307 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 29608-3 03 07 bp Feature: gene Location: 31157-31240 bp Feature: gene Location: 31268-32086 bp Ori: OUK31727.1 Feature: domain Description: AAA_10 Location: 31271-32072 bp Feature: domain Description: AAA_10 Location: 3 1271-3 2072 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TcpE (pfam12648), AAA_10 (pfam12846), RVT-GII

Seq: KZ153781.1 Enterococcus faecium strain IHC8 genomic scaffold IHC8_contig_62_consensus, whole genome shotgun sequence (3260 bp)
Overview 1 RT 1: 69-3241 bp Neighborhood of RT #1 [69, 3260] RVT-AbiP2 HsdM Feature: gene Location: 69-1457 bp Ori: OUK29319.1 Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 330-795 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 330-795 bp Feature: gene Location: 1795-3260 bp Ori: OUK29318.1 Feature: domain Description: HsdM Location: 1816-3241 bp Feature: domain Description: HsdM Location: 1816-324 1 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-AbiP2, HsdM (COG0286)