myRT

myRT report for GCA_002159255.1_ASM215925v1

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Seq: NFHI01000046.1 Massiliomicrobiota sp. An80 An80_contig_46, whole genome shotgun sequence (17810 bp)
Overview 1 RT 1: 1267-10035 bp Neighborhood of RT #1 [1267, 10043] INT_RitB_C_like INT_RitA_C_like RVT-GII GIIM Phage_int_SAM_4 INT_RitA_C_like INT_RitB_C_like Phage_int_SAM_1 INT_RitC_C_like RVT-GII DltE Feature: gene Location: 1267-2211 bp Feature: domain Description: INT_RitB_C_like Location: 1585-2152 bp Feature: domain Description: INT_RitB_C_like Location: 1 585-21 52 bp Feature: gene Location: 2208-3425 bp Feature: domain Description: INT_RitA_C_like Location: 2862-3390 bp Feature: domain Description: INT_RitA_C_like Location: 2862-3390 bp Feature: gene Location: 3608-4309 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3611-3836 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 361 1 -3836 bp Feature: domain Description: GIIM Note: maturase Location: 3890-4115 bp Feature: domain Description: GIIM Note: maturase Location: 3890-41 1 5 bp Feature: gene Location: 4462-5715 bp Feature: domain Description: Phage_int_SAM_4 Location: 4822-5050 bp Feature: domain Description: Phage_int_SAM_4 Location: 4822-5050 bp Feature: domain Description: INT_RitA_C_like Location: 5134-5677 bp Feature: domain Description: INT_RitA_C_like Location: 51 34-5677 bp Feature: gene Location: 5693-6670 bp Feature: domain Description: INT_RitB_C_like Location: 6029-6614 bp Feature: domain Description: INT_RitB_C_like Location: 6029-661 4 bp Feature: gene Location: 6657-7664 bp Feature: domain Description: Phage_int_SAM_1 Location: 6702-6948 bp Feature: domain Description: Phage_int_SAM_1 Location: 6702-6948 bp Feature: domain Description: INT_RitC_C_like Location: 7032-7581 bp Feature: domain Description: INT_RitC_C_like Location: 7032-7581 bp Feature: gene Location: 7721-8356 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7922-8303 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7922-8303 bp Feature: gene Location: 8747-8932 bp Feature: gene Location: 9297-10043 bp Feature: domain Description: DltE Location: 9303-10035 bp Feature: domain Description: DltE Location: 9303-1 0035 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_RitB_C_like (cd00797), INT_RitA_C_like (cd01188), RVT-GII, GIIM (pfam08388), Phage_int_SAM_4 (pfam13495), Phage_int_SAM_1 (pfam02899), INT_RitC_C_like (cd01182), DltE (COG3967)

Seq: NFHI01000003.1 Massiliomicrobiota sp. An80 An80_contig_3, whole genome shotgun sequence (94602 bp)
Overview 1 RT 1: 32369-38849 bp Neighborhood of RT #1 [32369, 39028] ilvH PRK03739 RVT-GII SEC-C PRK05716 InsA DDE_Tnp_IS1595 Feature: gene Location: 32369-32884 bp Feature: domain Description: ilvH Location: 32384-32846 bp Feature: domain Description: ilvH Location: 32 384-32 846 bp Feature: gene Location: 32888-34573 bp Feature: domain Description: PRK03739 Location: 32891-34550 bp Feature: domain Description: PRK03739 Location: 32 891-34550 bp Feature: gene Location: 35101-36841 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 35374-36163 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 35374-36163 bp Feature: gene Location: 36996-37865 bp Feature: domain Description: SEC-C Location: 37014-37065 bp Feature: domain Description: SEC-C Location: 37014-37065 bp Feature: domain Description: PRK05716 Location: 37125-37860 bp Feature: domain Description: PRK05716 Location: 3712 5-37860 bp Feature: gene Location: 37985-39028 bp Feature: domain Description: InsA Location: 38093-38369 bp Feature: domain Description: InsA Location: 38093-38369 bp Feature: domain Description: DDE_Tnp_IS1595 Location: 38390-38849 bp Feature: domain Description: DDE_Tnp_IS1595 Location: 38390-38849 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ilvH (PRK11895), PRK03739 (2-isopropylmalate synthase; Validated), RVT-GII, SEC-C (pfam02810), PRK05716 (methionine aminopeptidase; Validated), InsA (COG3677), DDE_Tnp_IS1595 (pfam12762)

Seq: NFHI01000079.1 Massiliomicrobiota sp. An80 An80_contig_79, whole genome shotgun sequence (5315 bp)
Overview 1 RT 1: 1570-4128 bp Neighborhood of RT #1 [1570, 4806] MviM PTS_IIB_chitobiose_lichenan RVT-GII Feature: gene Location: 1570-2565 bp Feature: domain Description: MviM Location: 1573-2449 bp Feature: domain Description: MviM Location: 1573 -2449 bp Feature: gene Location: 2560-2859 bp Feature: domain Description: PTS_IIB_chitobiose_lichenan Location: 2566-2845 bp Feature: domain Description: PTS_IIB_chitobiose_lichenan Location: 2566-2845 bp Feature: gene Location: 3066-4806 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3339-4128 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 3 3 9-4128 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MviM (COG0673), PTS_IIB_chitobiose_lichenan (cd05564), RVT-GII