myRT

myRT report for GCA_002159555.1_ASM215955v1

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Seq: NFIV01000005.1 Muribaculum sp. An289 An289_contig_5, whole genome shotgun sequence (223860 bp)
Overview 1 RT 1: 219852-223731 bp Neighborhood of RT #1 [219852, 223860] BACON BACON Omp28 RVT-GII GIIM Feature: gene Location: 219852-221306 bp Feature: domain Description: BACON Location: 219990-220206 bp Feature: domain Description: BACON Location: 21 9990-220206 bp Feature: domain Description: BACON Location: 220224-220509 bp Feature: domain Description: BACON Location: 220224-220509 bp Feature: domain Description: Omp28 Location: 220713-221190 bp Feature: domain Description: Omp28 Location: 22071 3-221 1 90 bp Feature: gene Location: 221320-221649 bp Feature: gene Location: 222489-223860 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 222831-223449 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 222831 -223449 bp Feature: domain Description: GIIM Note: maturase Location: 223500-223731 bp Feature: domain Description: GIIM Note: maturase Location: 223500-223731 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT BACON (pfam13004), Omp28 (pfam11551), RVT-GII, GIIM (pfam08388)

Seq: NFIV01000018.1 Muribaculum sp. An289 An289_contig_18, whole genome shotgun sequence (22234 bp)
Overview 1 RT 1: 113-5374 bp Neighborhood of RT #1 [113, 5424] Transposase_mut RVT-Retrons Arm-DNA-bind_5 Phage_int_SAM_5 INTN1_C_like Feature: gene Location: 113-1279 bp Feature: domain Description: Transposase_mut Location: 152-1220 bp Feature: domain Description: Transposase_mut Location: 152 -12 2 0 bp Feature: gene Location: 1656-2747 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1869-2499 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1869-2 499 bp Feature: gene Location: 2911-4122 bp Feature: gene Location: 4231-5424 bp Feature: domain Description: Arm-DNA-bind_5 Location: 4261-4504 bp Feature: domain Description: Arm-DNA-bind_5 Location: 42 61-4504 bp Feature: domain Description: Phage_int_SAM_5 Location: 4576-4843 bp Feature: domain Description: Phage_int_SAM_5 Location: 4576-4843 bp Feature: domain Description: INTN1_C_like Location: 4900-5374 bp Feature: domain Description: INTN1_C_like Location: 4900-5374 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Transposase_mut (pfam00872), RVT-Retrons, Arm-DNA-bind_5 (pfam17293), Phage_int_SAM_5 (pfam13102), INTN1_C_like (cd01185)

Seq: NFIV01000001.1 Muribaculum sp. An289 An289_contig_1, whole genome shotgun sequence (314731 bp)
Overview 1 RT 1: 53459-57127 bp Neighborhood of RT #1 [53459, 57127] RVT-DGRs Feature: gene Location: 53459-53881 bp Feature: gene Location: 53847-54278 bp Feature: gene Location: 54241-55428 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 54574-55201 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 54574-55201 bp Feature: gene Location: 55455-55715 bp Feature: gene Location: 55766-57127 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs