myRT

myRT report for GCA_002159585.1_ASM215958v1

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Seq: NFIX01000006.1 Muribaculum sp. An287 An287_contig_6, whole genome shotgun sequence (152943 bp)
Overview 1 RT 1: 110571-114475 bp Neighborhood of RT #1 [110571, 114475] RVT-DGRs Feature: gene Location: 110571-110846 bp Feature: gene Location: 110848-112314 bp Feature: gene Location: 112662-113684 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 112872-113469 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1 1 2872-1 1 3469 bp Feature: gene Location: 113659-114045 bp Feature: gene Location: 114059-114475 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs

Seq: NFIX01000019.1 Muribaculum sp. An287 An287_contig_19, whole genome shotgun sequence (22234 bp)
Overview 1 RT 1: 113-5374 bp Neighborhood of RT #1 [113, 5424] Transposase_mut RVT-Retrons Arm-DNA-bind_5 Phage_int_SAM_5 INTN1_C_like Feature: gene Location: 113-1279 bp Feature: domain Description: Transposase_mut Location: 152-1220 bp Feature: domain Description: Transposase_mut Location: 152 -12 2 0 bp Feature: gene Location: 1656-2747 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1869-2499 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1869-2 499 bp Feature: gene Location: 2911-4122 bp Feature: gene Location: 4231-5424 bp Feature: domain Description: Arm-DNA-bind_5 Location: 4261-4504 bp Feature: domain Description: Arm-DNA-bind_5 Location: 42 61-4504 bp Feature: domain Description: Phage_int_SAM_5 Location: 4576-4843 bp Feature: domain Description: Phage_int_SAM_5 Location: 4576-4843 bp Feature: domain Description: INTN1_C_like Location: 4900-5374 bp Feature: domain Description: INTN1_C_like Location: 4900-5374 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Transposase_mut (pfam00872), RVT-Retrons, Arm-DNA-bind_5 (pfam17293), Phage_int_SAM_5 (pfam13102), INTN1_C_like (cd01185)

Seq: NFIX01000005.1 Muribaculum sp. An287 An287_contig_5, whole genome shotgun sequence (225892 bp)
Overview 1 RT 1: 325-5925 bp Neighborhood of RT #1 [325, 6041] COG1373 RVT-GII GIIM BACON BACON Omp28 Feature: gene Location: 325-1692 bp Feature: domain Description: COG1373 Location: 340-1639 bp Feature: domain Description: COG13 73 Location: 3 40-163 9 bp Feature: gene Location: 1998-3404 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2340-2958 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 23 40-2958 bp Feature: domain Description: GIIM Note: maturase Location: 3009-3240 bp Feature: domain Description: GIIM Note: maturase Location: 3 009-3 240 bp Feature: gene Location: 4244-4573 bp Feature: gene Location: 4587-6041 bp Feature: domain Description: BACON Location: 4725-4941 bp Feature: domain Description: BACON Location: 4725-4941 bp Feature: domain Description: BACON Location: 4959-5244 bp Feature: domain Description: BACON Location: 4959-5244 bp Feature: domain Description: Omp28 Location: 5448-5925 bp Feature: domain Description: Omp28 Location: 5448-5925 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), COG1373 (Predicted ATPase, AAA+ superfamily ), BACON (pfam13004), Omp28 (pfam11551)