myRT

myRT report for GCA_002159835.1_ASM215983v1

Download annotations/find similar RTs

Seq: NFJL01000002.1 Blautia sp. An249 An249_contig_2, whole genome shotgun sequence (407670 bp)
Overview 1 RT 1: 213-4566 bp Neighborhood of RT #1 [213, 4613] RVT-GII GIIM AcrR MdlB Feature: gene Location: 213-341 bp Feature: gene Location: 453-1844 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 768-1392 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 768-1 392 bp Feature: domain Description: GIIM Note: maturase Location: 1449-1665 bp Feature: domain Description: GIIM Note: maturase Location: 1 449-1 665 bp Feature: gene Location: 2031-2648 bp Feature: domain Description: AcrR Location: 2067-2529 bp Feature: domain Description: AcrR Location: 2067-2529 bp Feature: gene Location: 2838-4613 bp Feature: domain Description: MdlB Location: 2856-4566 bp Feature: domain Description: MdlB Location: 2856-4566 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AcrR (COG1309), MdlB (COG1132), RVT-GII, GIIM (pfam08388)

Seq: NFJL01000010.1 Blautia sp. An249 An249_contig_10, whole genome shotgun sequence (131977 bp)
Overview 1 RT 1: 112138-116602 bp Neighborhood of RT #1 [112138, 116718] RVT-DGRs ABC_trans_CmpB Feature: gene Location: 112138-113826 bp Feature: gene Location: 113907-114224 bp Feature: gene Location: 114194-115576 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 114530-115235 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 114530-1152 35 bp Feature: gene Location: 115569-116246 bp Feature: gene Location: 116248-116718 bp Feature: domain Description: ABC_trans_CmpB Location: 116290-116602 bp Feature: domain Description: ABC_trans_CmpB Location: 1162 90-116602 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs, ABC_trans_CmpB (pfam06541)