myRT

myRT report for GCA_002159845.1_ASM215984v1

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Seq: NFJK01000049.1 Anaeromassilibacillus sp. An250 An250_contig_49, whole genome shotgun sequence (3927 bp)
Overview 1 RT 1: 105-3425 bp Neighborhood of RT #1 [105, 3433] RVT-GII Intron_maturas2 HNHc Maff2 Feature: gene Location: 105-1937 bp Ori: OUO70759.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 369-1200 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 369-1 200 bp Feature: domain Description: Intron_maturas2 Location: 1269-1587 bp Feature: domain Description: Intron_maturas2 Location: 1 269-1 587 bp Feature: domain Description: HNHc Note: nucleases Location: 1737-1908 bp Feature: domain Description: HNHc Note: nucleases Location: 1 737-1 908 bp Feature: gene Location: 2514-3185 bp Feature: gene Location: 3269-3433 bp Feature: domain Description: Maff2 Location: 3335-3425 bp Feature: domain Description: Maff2 Location: 3335-3425 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), Maff2 (pfam12750)

Seq: NFJK01000025.1 Anaeromassilibacillus sp. An250 An250_contig_25, whole genome shotgun sequence (30119 bp)
Overview 1 RT 1: 13861-19451 bp Neighborhood of RT #1 [13861, 19451] ArdA DUF3846 DUF4316 RVT-UG15 Pentapeptide Pentapeptide Feature: gene Location: 13861-14349 bp Feature: gene Location: 14362-16221 bp Ori: OUO72244.1 Feature: domain Description: ArdA Location: 14404-14926 bp Feature: domain Description: ArdA Location: 14404-1492 6 bp Feature: domain Description: DUF3846 Location: 15622-15889 bp Feature: domain Description: DUF3846 Location: 1562 2 -15889 bp Feature: domain Description: DUF4316 Location: 15976-16135 bp Feature: domain Description: DUF4316 Location: 15976-16135 bp Feature: gene Location: 16574-18082 bp Ori: OUO72259.1 Feature: RT Description: RVT-UG15 Note: UG15 RT Location: 17003-17408 bp Feature: RT Description: RVT-UG15 Note: UG15 RT Location: 17003-17408 bp Feature: gene Location: 18398-19057 bp Ori: OUO72245.1 Feature: domain Description: Pentapeptide Location: 18536-18647 bp Feature: domain Description: Pentapeptide Location: 18536-18647 bp Feature: domain Description: Pentapeptide Location: 18653-18752 bp Feature: domain Description: Pentapeptide Location: 18653-18752 bp Feature: gene Location: 19116-19451 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ArdA (pfam07275), DUF3846 (pfam12957), DUF4316 (pfam14195), RVT-UG15, Pentapeptide (pfam00805)

Seq: NFJK01000012.1 Anaeromassilibacillus sp. An250 An250_contig_12, whole genome shotgun sequence (104169 bp)
Overview 1 RT 1: 47303-64143 bp Neighborhood of RT #1 [47303, 64520] NPCBM Big_2 GH97_N Glyco_hydro_97 GH97_C Big_2 GH43_C2 Big_4 FIVAR FIVAR FIVAR RVT-Retrons BID_2 GH25_LytC-like BID_2 BID_2 PRK15098 PRK15098 GH43_C2 CBM6_cellulase-like FIVAR FIVAR FIVAR FIVAR Feature: gene Location: 47303-48655 bp Feature: gene Location: 49392-54821 bp Ori: OUO73396.1 Feature: domain Description: NPCBM Location: 49683-50100 bp Feature: domain Description: NPCBM Location: 49683 -50100 bp Feature: domain Description: Big_2 Location: 50148-50334 bp Feature: domain Description: Big_2 Location: 50148-503 3 4 bp Feature: domain Description: GH97_N Location: 50421-51144 bp Feature: domain Description: GH97_N Location: 50421-51144 bp Feature: domain Description: Glyco_hydro_97 Location: 51165-51894 bp Feature: domain Description: Glyco_hydro_97 Location: 51165-51894 bp Feature: domain Description: GH97_C Location: 51900-52173 bp Feature: domain Description: GH97_C Location: 51900-52173 bp Feature: domain Description: Big_2 Location: 52200-52401 bp Feature: domain Description: Big_2 Location: 52200-52401 bp Feature: domain Description: GH43_C2 Location: 52572-52974 bp Feature: domain Description: GH43 _C2 Location: 52572-52974 bp Feature: domain Description: Big_4 Location: 53094-53244 bp Feature: domain Description: Big_4 Location: 53 094-53 244 bp Feature: domain Description: FIVAR Location: 53673-53802 bp Feature: domain Description: FIVAR Location: 53 673 -53 802 bp Feature: domain Description: FIVAR Location: 53871-54000 bp Feature: domain Description: FIVAR Location: 53 871-54000 bp Feature: domain Description: FIVAR Location: 54030-54213 bp Feature: domain Description: FIVAR Location: 5403 0-54213 bp Feature: gene Location: 55188-56207 bp Ori: OUO73397.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 55329-55941 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 553 29-55941 bp Feature: gene Location: 56541-58907 bp Ori: OUO73398.1 Feature: domain Description: BID_2 Location: 56730-56934 bp Feature: domain Description: BID_2 Location: 5673 0-5693 4 bp Feature: domain Description: GH25_LytC-like Location: 56958-57522 bp Feature: domain Description: GH25_LytC-like Location: 56958-57522 bp Feature: domain Description: BID_2 Location: 57651-57801 bp Feature: domain Description: BID_2 Location: 57651-57801 bp Feature: domain Description: BID_2 Location: 57927-58065 bp Feature: domain Description: BID_2 Location: 57927-58065 bp Feature: gene Location: 59010-64520 bp Ori: OUO73399.1 Feature: domain Description: PRK15098 Location: 59145-60261 bp Feature: domain Description: PRK15098 Location: 59145-60261 bp Feature: domain Description: PRK15098 Location: 60732-61398 bp Feature: domain Description: PRK15098 Location: 6073 2-613 98 bp Feature: domain Description: GH43_C2 Location: 62019-62607 bp Feature: domain Description: GH43 _C2 Location: 62019-62607 bp Feature: domain Description: CBM6_cellulase-like Location: 62697-63030 bp Feature: domain Description: CBM6_cellulase-like Location: 62697-63 03 0 bp Feature: domain Description: FIVAR Location: 63393-63519 bp Feature: domain Description: FIVAR Location: 63 3 93 -63 519 bp Feature: domain Description: FIVAR Location: 63603-63732 bp Feature: domain Description: FIVAR Location: 63 603 -63 73 2 bp Feature: domain Description: FIVAR Location: 63750-63942 bp Feature: domain Description: FIVAR Location: 63 750-63 942 bp Feature: domain Description: FIVAR Location: 63957-64143 bp Feature: domain Description: FIVAR Location: 63 957-64143 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT NPCBM (smart00776), Big_2 (pfam02368), GH97_N (pfam14508), Glyco_hydro_97 (pfam10566), GH97_C (pfam14509), GH43_C2 (pfam17851), Big_4 (pfam07532), FIVAR (pfam07554), RVT-Retrons, BID_2 (smart00635)
GH25_LytC-like (cd06414), PRK15098 (beta-glucosidase BglX), CBM6_cellulase-like (cd04080)

Seq: NFJK01000028.1 Anaeromassilibacillus sp. An250 An250_contig_28, whole genome shotgun sequence (24326 bp)
Overview 1 RT 1: 10185-15036 bp Neighborhood of RT #1 [10185, 15707] DUF4928 Vsr RVT-UG15 Hypoth_Ymh HTH_ARAC Feature: gene Location: 10185-11120 bp Ori: OUO72126.1 Feature: domain Description: DUF4928 Location: 10269-11106 bp Feature: domain Description: DUF4 928 Location: 10269-11106 bp Feature: gene Location: 11127-11540 bp Ori: OUO72127.1 Feature: domain Description: Vsr Location: 11133-11532 bp Feature: domain Description: Vsr Location: 11133-11532 bp Feature: gene Location: 11617-13188 bp Ori: OUO72128.1 Feature: RT Description: RVT-UG15 Note: UG15 RT Location: 12061-12454 bp Feature: RT Description: RVT-UG15 Note: UG15 RT Location: 12061-124 54 bp Feature: gene Location: 13154-13972 bp Ori: OUO72129.1 Feature: domain Description: Hypoth_Ymh Location: 13574-13931 bp Feature: domain Description: Hypoth_Ymh Location: 13574 -13931 bp Feature: gene Location: 14709-15707 bp Ori: OUO72130.1 Feature: domain Description: HTH_ARAC Location: 14790-15036 bp Feature: domain Description: HTH_ARAC Location: 14 790-15036 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF4928 (pfam16280), Vsr (pfam03852), RVT-UG15, Hypoth_Ymh (pfam09509), HTH_ARAC (smart00342)

Seq: NFJK01000015.1 Anaeromassilibacillus sp. An250 An250_contig_15, whole genome shotgun sequence (90447 bp)
Overview 1 RT 1: 31799-37595 bp Neighborhood of RT #1 [31799, 37600] PRK13699 VirB4_CagE RVT-GII Intron_maturas2 HNHc DUF3991 PRK12459 Feature: gene Location: 31799-32308 bp Ori: OUO73037.1 Feature: domain Description: PRK13699 Location: 31982-32195 bp Feature: domain Description: PRK13699 Location: 31982-32195 bp Feature: gene Location: 32317-33141 bp Feature: domain Description: VirB4_CagE Location: 32353-33019 bp Feature: domain Description: VirB4_CagE Location: 3235 3-33019 bp Feature: gene Location: 33234-35066 bp Ori: OUO73038.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 33498-34326 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 33498-34326 bp Feature: domain Description: Intron_maturas2 Location: 34410-34734 bp Feature: domain Description: Intron_maturas2 Location: 34410-34734 bp Feature: domain Description: HNHc Note: nucleases Location: 34887-35037 bp Feature: domain Description: HNHc Note: nucleases Location: 34887-35 037 bp Feature: gene Location: 35443-36417 bp Ori: OUO73039.1 Feature: domain Description: DUF3991 Location: 35803-36016 bp Feature: domain Description: DUF3991 Location: 35 803-36016 bp Feature: gene Location: 36437-37600 bp Ori: OUO73040.1 Feature: domain Description: PRK12459 Location: 36446-37595 bp Feature: domain Description: PRK1245 9 Location: 36446-375 95 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK13699 (putative methylase; Provisional), VirB4_CagE (TIGR00929), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), DUF3991 (pfam13154), PRK12459 (S-adenosylmethionine synthetase; Provisional)