myRT

myRT report for GCA_002160215.1_ASM216021v1

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Seq: NFKD01000005.1 Bacteroides sp. An19 An19_contig_5, whole genome shotgun sequence (155437 bp)
Overview 1 RT 1: 109876-115093 bp Neighborhood of RT #1 [109876, 115110] TraG-D_C RVT-GII Intron_maturas2 HNHc YWFCY T4SS-DNA_transf Feature: gene Location: 109876-110289 bp Feature: gene Location: 110585-111763 bp Ori: OUP36289.1 Feature: domain Description: TraG-D_C Location: 111110-111443 bp Feature: domain Description: TraG-D_C Location: 1 1 1 1 1 0-1 1 1 443 bp Feature: gene Location: 111750-113555 bp Ori: OUP36236.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 112014-112836 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 201 4-1 1 2836 bp Feature: domain Description: Intron_maturas2 Location: 112914-113244 bp Feature: domain Description: Intron_maturas2 Location: 1 1 291 4-1 1 3244 bp Feature: domain Description: HNHc Note: nucleases Location: 113388-113532 bp Feature: domain Description: HNHc Note: nucleases Location: 1 1 3388-1 1 3532 bp Feature: gene Location: 113589-114062 bp Feature: gene Location: 114121-115110 bp Feature: domain Description: YWFCY Location: 114127-114304 bp Feature: domain Description: YWFCY Location: 1 1 41 27-1 1 4304 bp Feature: domain Description: T4SS-DNA_transf Location: 114595-115093 bp Feature: domain Description: T4SS-DNA_transf Location: 1 1 4595-1 1 5093 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TraG-D_C (pfam12696), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), YWFCY (pfam14293), T4SS-DNA_transf (pfam02534)

Seq: NFKD01000156.1 Bacteroides sp. An19 An19_contig_156, whole genome shotgun sequence (525 bp)
Overview 1 RT 1: 1-502 bp Neighborhood of RT #1 [1, 505] RVT-GII Feature: gene Location: 1-505 bp Ori: OUP25877.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 247-502 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 47-502 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: NFKD01000117.1 Bacteroides sp. An19 An19_contig_117, whole genome shotgun sequence (4066 bp)
Overview 1 RT 1: 673-4064 bp Neighborhood of RT #1 [673, 4066] RVT-GII Feature: gene Location: 673-3066 bp Feature: gene Location: 3145-3327 bp Feature: gene Location: 3551-4066 bp Ori: OUP26302.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3893-4064 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 893 -4064 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: NFKD01000006.1 Bacteroides sp. An19 An19_contig_6, whole genome shotgun sequence (147381 bp)
Overview 1 RT 1: 83027-90962 bp Neighborhood of RT #1 [83027, 91018] DUF4255 SSL2 WG_beta_rep RVT-UG24 dnaG Feature: gene Location: 83027-83557 bp Ori: OUP35622.1 Feature: domain Description: DUF4255 Location: 83057-83513 bp Feature: domain Description: DUF4 255 Location: 83057-83513 bp Feature: gene Location: 83631-85907 bp Ori: OUP35623.1 Feature: domain Description: SSL2 Location: 83691-84699 bp Feature: domain Description: SSL2 Location: 83691-84 699 bp Feature: domain Description: WG_beta_rep Location: 85686-85755 bp Feature: domain Description: WG_beta_rep Location: 85686-85755 bp Feature: gene Location: 85934-89302 bp Ori: OUP35624.1 Feature: RT Description: RVT-UG24 Note: UG24 RT Location: 86516-86972 bp Feature: RT Description: RVT-UG24 Note: UG24 RT Location: 86516-86972 bp Feature: gene Location: 89305-89985 bp Feature: gene Location: 89972-91018 bp Ori: OUP35626.1 Feature: domain Description: dnaG Location: 90068-90962 bp Feature: domain Description: dnaG Location: 90068-90962 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF4255 (pfam14065), SSL2 (COG1061), WG_beta_rep (pfam14903), RVT-UG24, dnaG (TIGR01391)

Seq: NFKD01000145.1 Bacteroides sp. An19 An19_contig_145, whole genome shotgun sequence (863 bp)
Overview 1 RT 1: 1-685 bp Neighborhood of RT #1 [1, 854] RVT-GII GIIM Feature: gene Location: 1-854 bp Ori: OUP25949.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7-427 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7-427 bp Feature: domain Description: GIIM Note: maturase Location: 484-685 bp Feature: domain Description: GIIM Note: maturase Location: 484-685 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: NFKD01000155.1 Bacteroides sp. An19 An19_contig_155, whole genome shotgun sequence (551 bp)
Overview 1 RT 1: 4-550 bp Neighborhood of RT #1 [4, 551] RVT-GII Feature: gene Location: 4-551 bp Ori: OUP25885.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 250-550 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 250-550 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII