myRT

myRT report for GCA_002160305.1_ASM216030v1

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Seq: NFKI01000029.1 Pseudoflavonifractor sp. An184 An184_contig_29, whole genome shotgun sequence (43308 bp)
Overview 1 RT 1: 13968-18666 bp Neighborhood of RT #1 [13968, 18666] Relaxase RVT-UG19 Feature: gene Location: 13968-14222 bp Feature: gene Location: 14188-15600 bp Ori: OUP54911.1 Feature: domain Description: Relaxase Location: 14251-14950 bp Feature: domain Description: Relaxase Location: 1 4251 -1 4950 bp Feature: gene Location: 15688-17760 bp Ori: OUP54912.1 Feature: RT Description: RVT-UG19 Note: UG19 RT Location: 16054-16543 bp Feature: RT Description: RVT-UG1 9 Note: UG1 9 RT Location: 1 6054-1 6543 bp Feature: gene Location: 18059-18358 bp Feature: gene Location: 18355-18666 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Relaxase (pfam03432), RVT-UG19

Seq: NFKI01000003.1 Pseudoflavonifractor sp. An184 An184_contig_3, whole genome shotgun sequence (149108 bp)
Overview 1 RT 1: 121898-127876 bp Neighborhood of RT #1 [121898, 127884] HTH_17 Phage_int_SAM_3 INT_ICEBs1_C_like RVT-Retrons trmB PhnK Feature: gene Location: 121898-122116 bp Ori: OUP58612.1 Feature: domain Description: HTH_17 Location: 121943-122090 bp Feature: domain Description: HTH_17 Location: 12 1943-12 2 090 bp Feature: gene Location: 122236-123465 bp Ori: OUP58613.1 Feature: domain Description: Phage_int_SAM_3 Location: 122449-122617 bp Feature: domain Description: Phage_int_SAM_3 Location: 12 2 449-12 2 617 bp Feature: domain Description: INT_ICEBs1_C_like Location: 122827-123325 bp Feature: domain Description: INT_ICEBs1_C_like Location: 12 2 82 7-12 332 5 bp Feature: gene Location: 123506-125209 bp Ori: OUP58614.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 123632-124235 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 12 3632 -12 42 35 bp Feature: gene Location: 126294-127040 bp Ori: OUP58615.1 Feature: domain Description: trmB Location: 126306-126888 bp Feature: domain Description: trmB Location: 12 6306-12 6888 bp Feature: gene Location: 127090-127884 bp Ori: OUP58616.1 Feature: domain Description: PhnK Location: 127093-127876 bp Feature: domain Description: PhnK Location: 12 7093-12 7876 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_17 (pfam12728), Phage_int_SAM_3 (pfam14659), INT_ICEBs1_C_like (cd01189), RVT-Retrons, trmB (PRK00121), PhnK (COG4107)

Seq: NFKI01000006.1 Pseudoflavonifractor sp. An184 An184_contig_6, whole genome shotgun sequence (84144 bp)
Overview 1 RT 1: 55245-61672 bp Neighborhood of RT #1 [55245, 61680] Phage_int_SAM_3 INT_ICEBs1_C_like Phage_int_SAM_3 INT_ICEBs1_C_like RVT-UG2 NlpD S2P-M50_SpoIVFB Feature: gene Location: 55245-56402 bp Ori: OUP57764.1 Feature: domain Description: Phage_int_SAM_3 Location: 55458-55626 bp Feature: domain Description: Phage_int_SAM_3 Location: 55458-55626 bp Feature: domain Description: INT_ICEBs1_C_like Location: 55821-56331 bp Feature: domain Description: INT_ICEBs1_C_like Location: 55821-563 3 1 bp Feature: gene Location: 56407-57981 bp Ori: OUP57765.1 Feature: domain Description: Phage_int_SAM_3 Location: 56623-56782 bp Feature: domain Description: Phage_int_SAM_3 Location: 56623 -56782 bp Feature: domain Description: INT_ICEBs1_C_like Location: 56983-57490 bp Feature: domain Description: INT_ICEBs1_C_like Location: 56983 -57490 bp Feature: gene Location: 58413-59777 bp Ori: OUP57766.1 Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 58614-59451 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 58614-59451 bp Feature: gene Location: 60158-61150 bp Ori: OUP57767.1 Feature: domain Description: NlpD Location: 60380-61127 bp Feature: domain Description: NlpD Location: 603 80-61127 bp Feature: gene Location: 61096-61680 bp Feature: domain Description: S2P-M50_SpoIVFB Location: 61210-61672 bp Feature: domain Description: S2P-M50_SpoIVFB Location: 61210-61672 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Phage_int_SAM_3 (pfam14659), INT_ICEBs1_C_like (cd01189), RVT-UG2, NlpD (COG0739), S2P-M50_SpoIVFB (cd06161)