myRT

myRT report for GCA_002160325.1_ASM216032v1

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Seq: NFKJ01000009.1 Lachnoclostridium sp. An181 An181_contig_9, whole genome shotgun sequence (113549 bp)
Overview 1 RT 1: 99807-105745 bp Neighborhood of RT #1 [99807, 105745] RelB_DinJ HTH_17 COG3177 RVT-Retrons HNHc DnaB_C Feature: gene Location: 99807-99998 bp Feature: domain Description: RelB_DinJ Location: 99810-99933 bp Feature: domain Description: RelB_DinJ Location: 9981 0-99933 bp Feature: gene Location: 100011-100898 bp Feature: domain Description: HTH_17 Location: 100017-100140 bp Feature: domain Description: HTH_1 7 Location: 1 0001 7-1 001 40 bp Feature: domain Description: COG3177 Location: 100251-100815 bp Feature: domain Description: COG31 77 Location: 1 00251 -1 0081 5 bp Feature: gene Location: 101326-103035 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 101452-102055 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 01 452-1 02055 bp Feature: gene Location: 103723-104814 bp Feature: domain Description: HNHc Note: nucleases Location: 103789-103900 bp Feature: domain Description: HNHc Note: nucleases Location: 1 03789-1 03900 bp Feature: domain Description: DnaB_C Location: 104104-104746 bp Feature: domain Description: DnaB_C Location: 1 041 04-1 04746 bp Feature: gene Location: 104843-105745 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_17 (pfam12728), COG3177 (Fic family protein ), RVT-Retrons, HNHc (smart00507), DnaB_C (pfam03796), RelB_DinJ (TIGR02384)