myRT

myRT report for GCA_002160435.1_ASM216043v1

Download annotations/find similar RTs

Seq: NFKO01000061.1 Pseudoflavonifractor sp. An176 An176_contig_61, whole genome shotgun sequence (1925 bp)
Overview 1 RT 1: 78-1299 bp Neighborhood of RT #1 [78, 1475] RVT-GII GIIM Feature: gene Location: 78-1475 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 390-1011 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 390-1 01 1 bp Feature: domain Description: GIIM Note: maturase Location: 1071-1299 bp Feature: domain Description: GIIM Note: maturase Location: 1 071 -1 299 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: NFKO01000003.1 Pseudoflavonifractor sp. An176 An176_contig_3, whole genome shotgun sequence (180812 bp)
Overview 1 RT 1: 18580-23829 bp Neighborhood of RT #1 [18580, 23858] CotJA CotJB CotJC RVT-Retrons YbjD YbjD SR_TndX_transposase Feature: gene Location: 18580-19032 bp Feature: domain Description: CotJA Location: 18643-18748 bp Feature: domain Description: CotJA Location: 18643-18748 bp Feature: domain Description: CotJB Location: 18796-19006 bp Feature: domain Description: CotJB Location: 18796-19006 bp Feature: gene Location: 19032-19235 bp Feature: domain Description: CotJC Location: 19035-19224 bp Feature: domain Description: CotJC Location: 19035-192 2 4 bp Feature: gene Location: 19441-20496 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 19585-20143 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 19585-2 0143 bp Feature: gene Location: 20677-22707 bp Feature: domain Description: YbjD Location: 20686-20914 bp Feature: domain Description: YbjD Location: 2 0686-2 0914 bp Feature: domain Description: YbjD Location: 21466-21889 bp Feature: domain Description: YbjD Location: 2 1466-2 1889 bp Feature: gene Location: 23484-23858 bp Feature: domain Description: SR_TndX_transposase Location: 23499-23829 bp Feature: domain Description: SR_TndX_transposase Location: 2 3499-2 382 9 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CotJA (pfam11007), CotJB (pfam12652), CotJC (COG3546), RVT-Retrons, YbjD (COG3593), SR_TndX_transposase (cd03770)