myRT

myRT report for GCA_002160825.1_ASM216082v1

Download annotations/find similar RTs

Seq: NFLI01000003.1 Lachnoclostridium sp. An131 An131_contig_3, whole genome shotgun sequence (234804 bp)
Overview 1 RT 1: 112225-134705 bp Neighborhood of RT #1 [112225, 134707] HTH_32 DDE_3 dnaG RVT-UNC PRK09358 COG1373 RVT-GII GIIM PRK11824 rpsO Feature: gene Location: 112225-112455 bp Feature: gene Location: 112591-113781 bp Ori: OUQ28334.1 Feature: domain Description: HTH_32 Location: 112783-113035 bp Feature: domain Description: HTH_32 Location: 1 1 2783-1 1 3035 bp Feature: domain Description: DDE_3 Location: 113212-113650 bp Feature: domain Description: DDE_3 Location: 1 1 321 2-1 1 3650 bp Feature: gene Location: 113974-121437 bp Ori: OUQ28335.1 Feature: domain Description: dnaG Location: 113989-115138 bp Feature: domain Description: dnaG Location: 1 1 3989-1 1 51 38 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 115810-116446 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 1 1 581 0-1 1 6446 bp Feature: gene Location: 122512-125265 bp Ori: OUQ28336.1 Feature: domain Description: PRK09358 Location: 124858-125107 bp Feature: domain Description: PRK09358 Location: 1 24858-1 251 07 bp Feature: gene Location: 125269-127884 bp Feature: gene Location: 127886-129157 bp Feature: gene Location: 129286-130109 bp Feature: domain Description: COG1373 Location: 129328-129712 bp Feature: domain Description: COG1 373 Location: 1 29328-1 2971 2 bp Feature: gene Location: 130194-131496 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 130395-131013 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 30395-1 31 01 3 bp Feature: domain Description: GIIM Note: maturase Location: 131067-131277 bp Feature: domain Description: GIIM Note: maturase Location: 1 31 067-1 31 277 bp Feature: gene Location: 132108-134201 bp Ori: OUQ28339.1 Feature: domain Description: PRK11824 Location: 132120-134187 bp Feature: domain Description: PRK1 1 824 Location: 1 321 20-1 341 87 bp Feature: gene Location: 134441-134707 bp Ori: OUQ28340.1 Feature: domain Description: rpsO Location: 134444-134705 bp Feature: domain Description: rpsO Location: 1 34444-1 34705 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_32 (pfam13565), DDE_3 (pfam13358), dnaG (TIGR01391), RVT-UG10/RVT-UG1/RVT-DGRs/RVT-UG25(RVT-UNC), PRK09358 (adenosine deaminase; Provisional), COG1373 (Predicted ATPase, AAA+ superfamily ), RVT-GII, GIIM (pfam08388), PRK11824 (polynucleotide phosphorylase/polyadenylase; Provisional), rpsO (PRK05626)

Seq: NFLI01000022.1 Lachnoclostridium sp. An131 An131_contig_22, whole genome shotgun sequence (54950 bp)
Overview 1 RT 1: 17586-26823 bp Neighborhood of RT #1 [17586, 27005] BaeS PRK11413 RVT-GII GIIM SH3_3 SH3_3 spore_SleB YdiL Feature: gene Location: 17586-20279 bp Ori: OUQ23598.1 Feature: domain Description: BaeS Location: 19338-20145 bp Feature: domain Description: BaeS Location: 19338-2 0145 bp Feature: gene Location: 20384-22669 bp Ori: OUQ23599.1 Feature: domain Description: PRK11413 Location: 20387-22664 bp Feature: domain Description: PRK11413 Location: 2 0387-2 2 664 bp Feature: gene Location: 23226-24509 bp Ori: OUQ23600.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 23430-24045 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 3430-2 4045 bp Feature: domain Description: GIIM Note: maturase Location: 24105-24336 bp Feature: domain Description: GIIM Note: maturase Location: 2 4105-2 4336 bp Feature: gene Location: 24740-25768 bp Ori: OUQ23601.1 Feature: domain Description: SH3_3 Location: 24944-25088 bp Feature: domain Description: SH3_3 Location: 2 4944-2 5088 bp Feature: domain Description: SH3_3 Location: 25157-25319 bp Feature: domain Description: SH3_3 Location: 2 5157-2 5319 bp Feature: domain Description: spore_SleB Location: 25391-25763 bp Feature: domain Description: spore_SleB Location: 2 5391-2 5763 bp Feature: gene Location: 26013-27005 bp Ori: OUQ23602.1 Feature: domain Description: YdiL Location: 26181-26823 bp Feature: domain Description: YdiL Location: 2 6181-2 682 3 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT BaeS (COG0642), PRK11413 (putative hydratase; Provisional), RVT-GII, GIIM (pfam08388), SH3_3 (pfam08239), spore_SleB (TIGR02869), YdiL (COG1266)