myRT

myRT report for GCA_002160985.1_ASM216098v1

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Seq: NFLQ01000004.1 Lachnoclostridium sp. An118 An118_contig_4, whole genome shotgun sequence (260896 bp)
Overview 1 RT 1: 59472-63531 bp Neighborhood of RT #1 [59472, 63566] HTH_XRE MoxR RVT-GII HNHc HTH_XRE Feature: gene Location: 59472-59723 bp Ori: OUQ51385.1 Feature: domain Description: HTH_XRE Location: 59523-59694 bp Feature: domain Description: HTH_XRE Location: 59523-59694 bp Feature: gene Location: 59743-60249 bp Ori: OUQ51386.1 Feature: domain Description: MoxR Location: 59830-60055 bp Feature: domain Description: MoxR Location: 59830-60055 bp Feature: gene Location: 60371-62323 bp Ori: OUQ51387.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 60746-61469 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 60746-61 469 bp Feature: domain Description: HNHc Note: nucleases Location: 62084-62213 bp Feature: domain Description: HNHc Note: nucleases Location: 62084-6221 3 bp Feature: gene Location: 62910-63179 bp Feature: gene Location: 63318-63566 bp Ori: OUQ51389.1 Feature: domain Description: HTH_XRE Location: 63354-63531 bp Feature: domain Description: HTH_XRE Location: 63354-63531 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_XRE (smart00530), MoxR (COG0714), RVT-GII, HNHc (smart00507)

Seq: NFLQ01000008.1 Lachnoclostridium sp. An118 An118_contig_8, whole genome shotgun sequence (152113 bp)
Overview 1 RT 1: 96531-103472 bp Neighborhood of RT #1 [96531, 103552] Cas_Cas1 Cas2_I_II_III RVT-CRISPR COG4951 WYL DUF4407 Feature: gene Location: 96531-97535 bp Ori: OUQ50179.1 Feature: domain Description: Cas_Cas1 Location: 96543-97386 bp Feature: domain Description: Cas_Cas1 Location: 96543-97386 bp Feature: gene Location: 97513-97800 bp Ori: OUQ50180.1 Feature: domain Description: Cas2_I_II_III Location: 97522-97753 bp Feature: domain Description: Cas2 _I_II_III Location: 9752 2 -97753 bp Feature: gene Location: 97913-100363 bp Ori: OUQ50181.1 Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 97916-98330 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 97916-98330 bp Feature: domain Description: COG4951 Location: 98993-99659 bp Feature: domain Description: COG4951 Location: 98993-99659 bp Feature: gene Location: 101557-102663 bp Ori: OUQ50182.1 Feature: domain Description: WYL Location: 102103-102619 bp Feature: domain Description: WYL Location: 102 103-102 619 bp Feature: gene Location: 102845-103552 bp Ori: OUQ50183.1 Feature: domain Description: DUF4407 Location: 103121-103472 bp Feature: domain Description: DUF4407 Location: 10312 1-103472 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Cas_Cas1 (pfam01867), Cas2_I_II_III (cl11442), RVT-CRISPR, COG4951 (Uncharacterized protein ), WYL (pfam13280), DUF4407 (pfam14362)