myRT

myRT report for GCA_002161005.1_ASM216100v1

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Seq: NFLR01000001.1 Alistipes sp. An116 An116_contig_1, whole genome shotgun sequence (330402 bp)
Overview 1 RT 1: 266286-271016 bp 2 RT 2: 287845-293674 bp Neighborhood of RT #1 [266286, 271099] MPP_MS158 RVT-Retrons HTH_17 HTH_HspR-like_MBC Neighborhood of RT #2 [287845, 293682] RVT-GII Intron_maturas2 HNHc Bac_Flav_CT_G Feature: gene Location: 266286-267062 bp Feature: gene Location: 267059-267829 bp Feature: domain Description: MPP_MS158 Location: 267068-267770 bp Feature: domain Description: MPP_MS1 58 Location: 267068-267770 bp Feature: gene Location: 268029-269762 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 268179-268776 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2681 79-268776 bp Feature: gene Location: 270428-270724 bp Feature: domain Description: HTH_17 Location: 270545-270689 bp Feature: domain Description: HTH_1 7 Location: 270545-270689 bp Feature: gene Location: 270737-271099 bp Feature: domain Description: HTH_HspR-like_MBC Location: 270899-271016 bp Feature: domain Description: HTH_HspR-like_MBC Location: 270899-271 01 6 bp Feature: gene Location: 287845-288201 bp Feature: gene Location: 288294-288674 bp Feature: gene Location: 288912-290735 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 289176-289998 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2891 76-289998 bp Feature: domain Description: Intron_maturas2 Location: 290169-290409 bp Feature: domain Description: Intron_maturas2 Location: 2901 69-290409 bp Feature: domain Description: HNHc Note: nucleases Location: 290526-290697 bp Feature: domain Description: HNHc Note: nucleases Location: 290526-290697 bp Feature: gene Location: 290767-291228 bp Feature: gene Location: 291283-293682 bp Feature: domain Description: Bac_Flav_CT_G Location: 291286-293674 bp Feature: domain Description: Bac_Flav_CT_G Location: 291 286-293674 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MPP_MS158 (cd07404), RVT-Retrons, HTH_17 (pfam12728), HTH_HspR-like_MBC (cd04767), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), Bac_Flav_CT_G (TIGR03783)