myRT

myRT report for GCA_002161035.1_ASM216103v1

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Seq: NFLS01000001.1 Lactobacillus gallinarum strain An115 An115_contig_1, whole genome shotgun sequence (192639 bp)
Overview 1 RT 1: 139539-143128 bp Neighborhood of RT #1 [139539, 143154] Avd_like RVT-DGRs Phage_XkdX Feature: gene Location: 139539-140402 bp Feature: gene Location: 140507-140941 bp Ori: OUQ58285.1 Feature: domain Description: Avd_like Location: 140666-140915 bp Feature: domain Description: Avd_like Location: 1 40666-1 4091 5 bp Feature: gene Location: 141203-142348 bp Ori: OUQ58286.1 Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 141389-142103 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1 41 389-1 421 03 bp Feature: gene Location: 142379-142960 bp Feature: gene Location: 142960-143154 bp Ori: OUQ58288.1 Feature: domain Description: Phage_XkdX Location: 143026-143128 bp Feature: domain Description: Phage_XkdX Location: 1 43026-1 431 28 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Avd_like (cd16376), RVT-DGRs, Phage_XkdX (pfam09693)

Seq: NFLS01000010.1 Lactobacillus gallinarum strain An115 An115_contig_10, whole genome shotgun sequence (49907 bp)
Overview 1 RT 1: 20827-25745 bp Neighborhood of RT #1 [20827, 25745] dTDP_sugar_isom RmlD_sub_bind RVT-AbiA HEPN_AbiA_CTD Feature: gene Location: 20827-21435 bp Ori: OUQ56294.1 Feature: domain Description: dTDP_sugar_isom Location: 20866-21418 bp Feature: domain Description: dTDP_sugar_isom Location: 2 0866-2 1418 bp Feature: gene Location: 21456-22442 bp Ori: OUQ56295.1 Feature: domain Description: RmlD_sub_bind Location: 21459-22404 bp Feature: domain Description: RmlD_sub_bind Location: 2 1459-2 2 404 bp Feature: gene Location: 22596-24551 bp Ori: OUQ56296.1 Feature: RT Description: RVT-AbiA Note: AbiA RT Location: 22965-23463 bp Feature: RT Description: RVT-AbiA Note: AbiA RT Location: 2 2 965-2 3463 bp Feature: domain Description: HEPN_AbiA_CTD Location: 24105-24516 bp Feature: domain Description: HEPN_AbiA_CTD Location: 2 4105-2 4516 bp Feature: gene Location: 24585-25415 bp Feature: gene Location: 25431-25745 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT dTDP_sugar_isom (pfam00908), RmlD_sub_bind (pfam04321), RVT-AbiA, HEPN_AbiA_CTD (pfam18732)