myRT

myRT report for GCA_002161285.1_ASM216128v1

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Seq: NFHH01000037.1 Blautia sp. An81 An81_contig_37, whole genome shotgun sequence (29394 bp)
Overview 1 RT 1: 21237-28242 bp Neighborhood of RT #1 [21237, 28304] COG3538 AMS1 RVT-GII Phage_int_SAM_1 INT_RitA_C_like INT_RitB_C_like Feature: gene Location: 21237-22526 bp Ori: OUN24679.1 Feature: domain Description: COG3538 Location: 21240-22518 bp Feature: domain Description: COG3538 Location: 21 240-2251 8 bp Feature: gene Location: 22758-24530 bp Feature: domain Description: AMS1 Location: 22785-24528 bp Feature: domain Description: AMS1 Location: 22785-24528 bp Feature: gene Location: 25238-25996 bp Ori: OUN24680.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 25559-25940 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 25559-25940 bp Feature: gene Location: 26093-27328 bp Ori: OUN24681.1 Feature: domain Description: Phage_int_SAM_1 Location: 26465-26678 bp Feature: domain Description: Phage_int_SAM_1 Location: 26465-26678 bp Feature: domain Description: INT_RitA_C_like Location: 26762-27299 bp Feature: domain Description: INT_RitA_C_like Location: 26762-27299 bp Feature: gene Location: 27321-28304 bp Ori: OUN24682.1 Feature: domain Description: INT_RitB_C_like Location: 27657-28242 bp Feature: domain Description: INT_RitB_C_like Location: 27657-28242 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3538 (Meiotically up-regulated gene 157 (Mug157) protein (function unknown) ), AMS1 (COG0383), RVT-GII, Phage_int_SAM_1 (pfam02899), INT_RitA_C_like (cd01188), INT_RitB_C_like (cd00797)

Seq: NFHH01000048.1 Blautia sp. An81 An81_contig_48, whole genome shotgun sequence (14296 bp)
Overview 1 RT 1: 4598-13740 bp Neighborhood of RT #1 [4598, 14174] DUF3849 YtxK COG4646 RVT-GII Intron_maturas2 HNHc COG4646 Feature: gene Location: 4598-10825 bp Ori: OUN22703.1 Feature: domain Description: DUF3849 Location: 6974-7322 bp Feature: domain Description: DUF3849 Location: 6974-732 2 bp Feature: domain Description: YtxK Location: 7880-8609 bp Feature: domain Description: YtxK Location: 7880-8609 bp Feature: domain Description: COG4646 Location: 8678-10811 bp Feature: domain Description: COG4646 Location: 8678-10811 bp Feature: gene Location: 11256-11438 bp Feature: gene Location: 11401-13215 bp Ori: OUN22704.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11668-12484 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11668-12 484 bp Feature: domain Description: Intron_maturas2 Location: 12553-12883 bp Feature: domain Description: Intron_maturas2 Location: 12 553-12 883 bp Feature: domain Description: HNHc Note: nucleases Location: 13033-13180 bp Feature: domain Description: HNHc Note: nucleases Location: 13033-13180 bp Feature: gene Location: 13212-14174 bp Feature: domain Description: COG4646 Location: 13323-13740 bp Feature: domain Description: COG4646 Location: 1332 3-13740 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF3849 (pfam12960), YtxK (COG0827), COG4646 (Adenine-specific DNA methylase, N12 class ), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: NFHH01000073.1 Blautia sp. An81 An81_contig_73, whole genome shotgun sequence (1057 bp)
Overview 1 RT 1: 1-1057 bp Neighborhood of RT #1 [1, 1057] RVT-GII GIIM Feature: gene Location: 1-939 bp Ori: OUN20337.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4-289 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4-289 bp Feature: domain Description: GIIM Note: maturase Location: 340-574 bp Feature: domain Description: GIIM Note: maturase Location: 3 40-574 bp Feature: gene Location: 977-1057 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: NFHH01000060.1 Blautia sp. An81 An81_contig_60, whole genome shotgun sequence (2222 bp)
Overview 1 RT 1: 7-2223 bp Neighborhood of RT #1 [7, 2222] COG4646 RVT_N RVT-GII Feature: gene Location: 7-918 bp Ori: OUN21299.1 Feature: domain Description: COG4646 Location: 118-538 bp Feature: domain Description: COG4 64 6 Location: 118-538 bp Feature: gene Location: 1518-2222 bp Ori: OUN21300.1 Feature: domain Description: RVT_N Location: 1569-1812 bp Feature: domain Description: RVT_N Location: 1569-1812 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1857-2223 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1857-2223 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG4646 (Adenine-specific DNA methylase, N12 class ), RVT_N (pfam13655), RVT-GII

Seq: NFHH01000009.1 Blautia sp. An81 An81_contig_9, whole genome shotgun sequence (162045 bp)
Overview 1 RT 1: 113-2062 bp 2 RT 2: 117189-123643 bp Neighborhood of RT #1 [113, 2062] RVT-GII GIIM DUF3789 Neighborhood of RT #2 [117189, 123786] YdiF Y1_Tnp RVT-GII GIIM PurR PBP2_TMBP_like PBP2_Fbp_like_5 Feature: gene Location: 113-820 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 116-356 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 116-35 6 bp Feature: domain Description: GIIM Note: maturase Location: 416-647 bp Feature: domain Description: GIIM Note: maturase Location: 416-647 bp Feature: gene Location: 906-1040 bp Ori: OUN30057.1 Feature: domain Description: DUF3789 Location: 918-1005 bp Feature: domain Description: DUF3789 Location: 918-1005 bp Feature: gene Location: 1037-2062 bp Feature: gene Location: 117189-118700 bp Ori: OUN30205.1 Feature: domain Description: YdiF Location: 117198-118692 bp Feature: domain Description: YdiF Location: 117198-118692 bp Feature: gene Location: 118862-119326 bp Ori: OUN30149.1 Feature: domain Description: Y1_Tnp Location: 118895-119255 bp Feature: domain Description: Y1_Tnp Location: 118895 -11925 5 bp Feature: gene Location: 119589-120191 bp Ori: OUN30150.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 119595-119724 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1195 95 -119724 bp Feature: domain Description: GIIM Note: maturase Location: 119787-120009 bp Feature: domain Description: GIIM Note: maturase Location: 119787-120009 bp Feature: gene Location: 120273-122450 bp Ori: OUN30151.1 Feature: domain Description: PurR Location: 120279-120990 bp Feature: domain Description: PurR Location: 120279-120990 bp Feature: domain Description: PBP2_TMBP_like Location: 121284-122421 bp Feature: domain Description: PBP2_TMBP_like Location: 121284-122421 bp Feature: gene Location: 122749-123786 bp Ori: OUN30152.1 Feature: domain Description: PBP2_Fbp_like_5 Location: 122854-123643 bp Feature: domain Description: PBP2_Fbp_like_5 Location: 12285 4-123643 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), DUF3789 (pfam12664), YdiF (COG4670), Y1_Tnp (pfam01797), PurR (COG1609), PBP2_TMBP_like (cd13585), PBP2_Fbp_like_5 (cd13551)

Seq: NFHH01000075.1 Blautia sp. An81 An81_contig_75, whole genome shotgun sequence (861 bp)
Overview 1 RT 1: 129-672 bp Neighborhood of RT #1 [129, 671] RVT-GII Feature: gene Location: 129-671 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 294-672 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 294-6 72 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII