myRT

myRT report for GCA_002161355.1_ASM216135v1

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Seq: NFHL01000004.1 Lachnoclostridium sp. An76 An76_contig_4, whole genome shotgun sequence (277122 bp)
Overview 1 RT 1: 92820-100896 bp 2 RT 2: 239674-245142 bp Neighborhood of RT #1 [92820, 100896] YtxK COG4646 RVT-GII Intron_maturas2 HNHc KOG1000 PRK13922 Neighborhood of RT #2 [239674, 246446] PHA02517 RVT-GII DLP_2 DLP_2 Feature: gene Location: 92820-95921 bp Feature: domain Description: YtxK Location: 93273-93672 bp Feature: domain Description: YtxK Location: 93273-93672 bp Feature: domain Description: COG4646 Location: 93792-95919 bp Feature: domain Description: COG4646 Location: 93792-9591 9 bp Feature: gene Location: 96367-96549 bp Feature: gene Location: 96512-98326 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 96779-97595 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 96779-97595 bp Feature: domain Description: Intron_maturas2 Location: 97664-97994 bp Feature: domain Description: Intron_maturas2 Location: 97664-97994 bp Feature: domain Description: HNHc Note: nucleases Location: 98144-98291 bp Feature: domain Description: HNHc Note: nucleases Location: 981 44-98291 bp Feature: gene Location: 98608-100245 bp Feature: domain Description: KOG1000 Location: 99205-99421 bp Feature: domain Description: KOG1 000 Location: 99205-99421 bp Feature: domain Description: PRK13922 Location: 99877-100144 bp Feature: domain Description: PRK1 3922 Location: 99877-1 001 44 bp Feature: gene Location: 100372-100896 bp Feature: gene Location: 239674-240597 bp Feature: domain Description: PHA02517 Location: 239776-240571 bp Feature: domain Description: PHA0251 7 Location: 239776-240571 bp Feature: gene Location: 240647-241366 bp Feature: gene Location: 241590-242142 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 241596-241776 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 241 596-241 776 bp Feature: gene Location: 242438-244174 bp Feature: domain Description: DLP_2 Location: 242606-243182 bp Feature: domain Description: DLP_2 Location: 242606-2431 82 bp Feature: gene Location: 244191-246446 bp Feature: domain Description: DLP_2 Location: 244368-245142 bp Feature: domain Description: DLP_2 Location: 244368-2451 42 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YtxK (COG0827), COG4646 (Adenine-specific DNA methylase, N12 class ), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), KOG1000 (KOG1000, Chromatin remodeling protein HARP/SMARCAL1, DEAD-box superfamily ), PRK13922 (rod shape-determining protein MreC; Provisional), PHA02517 (putative transposase OrfB; Reviewed), DLP_2 (cd09912)