myRT

myRT report for GCA_002161645.1_ASM216164v1

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Seq: NFIF01000001.1 Blautia sp. An46 An46_contig_1, whole genome shotgun sequence (392390 bp)
Overview 1 RT 1: 96026-106068 bp Neighborhood of RT #1 [96026, 107300] YtxK COG4646 RVT-GII Intron_maturas2 HNHc KOG1000 ArdC YodL DUF3849 LPD18 LPD16 Feature: gene Location: 96026-99130 bp Feature: domain Description: YtxK Location: 96476-96878 bp Feature: domain Description: YtxK Location: 96476-96878 bp Feature: domain Description: COG4646 Location: 97001-99128 bp Feature: domain Description: COG4646 Location: 97001 -991 28 bp Feature: gene Location: 99576-99758 bp Feature: gene Location: 99721-101535 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 99988-100804 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 99988-1 00804 bp Feature: domain Description: Intron_maturas2 Location: 100873-101203 bp Feature: domain Description: Intron_maturas2 Location: 1 00873-1 01 203 bp Feature: domain Description: HNHc Note: nucleases Location: 101353-101500 bp Feature: domain Description: HNHc Note: nucleases Location: 1 01 353-1 01 500 bp Feature: gene Location: 101817-103520 bp Feature: domain Description: KOG1000 Location: 102414-102630 bp Feature: domain Description: KOG1 000 Location: 1 0241 4-1 02630 bp Feature: gene Location: 103581-107300 bp Feature: domain Description: ArdC Location: 103797-104376 bp Feature: domain Description: ArdC Location: 1 03797-1 04376 bp Feature: domain Description: YodL Location: 104535-104829 bp Feature: domain Description: YodL Location: 1 04535-1 04829 bp Feature: domain Description: DUF3849 Location: 104883-105258 bp Feature: domain Description: DUF3849 Location: 1 04883-1 05258 bp Feature: domain Description: LPD18 Location: 105288-105531 bp Feature: domain Description: LPD1 8 Location: 1 05288-1 05531 bp Feature: domain Description: LPD16 Location: 105828-106068 bp Feature: domain Description: LPD1 6 Location: 1 05828-1 06068 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT KOG1000 (KOG1000, Chromatin remodeling protein HARP/SMARCAL1, DEAD-box superfamily ), ArdC (COG4227), YodL (pfam14191), DUF3849 (pfam12960), LPD18 (pfam18832), LPD16 (pfam18830), YtxK (COG0827), COG4646 (Adenine-specific DNA methylase, N12 class ), RVT-GII, Intron_maturas2 (pfam01348)
HNHc (smart00507)

Seq: NFIF01000006.1 Blautia sp. An46 An46_contig_6, whole genome shotgun sequence (181631 bp)
Overview 1 RT 1: 76302-80296 bp Neighborhood of RT #1 [76302, 80460] Maff2 RVT-GII Intron_maturas2 HNHc PrgI Feature: gene Location: 76302-76517 bp Feature: domain Description: Maff2 Location: 76305-76512 bp Feature: domain Description: Maff2 Location: 76305-76512 bp Feature: gene Location: 76535-77203 bp Feature: gene Location: 77779-79611 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 78043-78874 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 78043-78874 bp Feature: domain Description: Intron_maturas2 Location: 78946-79261 bp Feature: domain Description: Intron_maturas2 Location: 78946-792 61 bp Feature: domain Description: HNHc Note: nucleases Location: 79408-79582 bp Feature: domain Description: HNHc Note: nucleases Location: 79408-79582 bp Feature: gene Location: 79687-79989 bp Feature: gene Location: 80005-80460 bp Feature: domain Description: PrgI Location: 80026-80296 bp Feature: domain Description: PrgI Location: 8002 6-802 96 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Maff2 (pfam12750), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), PrgI (pfam12666)

Seq: NFIF01000033.1 Blautia sp. An46 An46_contig_33, whole genome shotgun sequence (21195 bp)
Overview 1 RT 1: 10455-16727 bp Neighborhood of RT #1 [10455, 16825] COG3538 COG3538 AMS1 RVT-GII Ig_mannosidase PHA03378 LD-carboxypeptidase Feature: gene Location: 10455-11420 bp Feature: domain Description: COG3538 Location: 10458-10779 bp Feature: domain Description: COG3 53 8 Location: 10458-10779 bp Feature: domain Description: COG3538 Location: 10785-11412 bp Feature: domain Description: COG3 53 8 Location: 10785-11412 bp Feature: gene Location: 11652-13424 bp Feature: domain Description: AMS1 Location: 11679-13422 bp Feature: domain Description: AMS1 Location: 11679-13 422 bp Feature: gene Location: 14132-14959 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14453-14906 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14453 -14906 bp Feature: gene Location: 14928-15440 bp Feature: domain Description: Ig_mannosidase Location: 15204-15399 bp Feature: domain Description: Ig_mannosidase Location: 15204-153 99 bp Feature: gene Location: 15560-16825 bp Feature: domain Description: PHA03378 Location: 15629-15854 bp Feature: domain Description: PHA03 3 78 Location: 15629-15854 bp Feature: domain Description: LD-carboxypeptidase Location: 16220-16727 bp Feature: domain Description: LD-carboxypeptidase Location: 16220-16727 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3538 (Meiotically up-regulated gene 157 (Mug157) protein (function unknown) ), AMS1 (COG0383), RVT-GII, Ig_mannosidase (pfam17753), PHA03378 (EBNA-3B; Provisional), LD-carboxypeptidase (cd14852)