myRT

myRT report for GCA_002163225.1_ASM216322v1

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Seq: NHZM01000001.1 Klebsiella pneumoniae strain UCI108 scaffold00001, whole genome shotgun sequence (3521148 bp)
Overview 1 RT 1: 3343949-3353346 bp Neighborhood of RT #1 [3343949, 3353462] COG2958 AAA_15 RVT-Retrons COG0610 AAA_13 AAA_13 Feature: gene Location: 3343949-3344881 bp Feature: domain Description: COG2958 Location: 3343967-3344861 bp Feature: domain Description: COG2958 Location: 3343967-3344861 bp Feature: gene Location: 3345455-3346173 bp Feature: domain Description: AAA_15 Location: 3345458-3345875 bp Feature: domain Description: AAA_1 5 Location: 3345458-3345875 bp Feature: gene Location: 3347530-3348630 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3347671-3348235 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3347671 -3348235 bp Feature: gene Location: 3349172-3352291 bp Feature: domain Description: COG0610 Location: 3349256-3352268 bp Feature: domain Description: COG061 0 Location: 3349256-3352268 bp Feature: gene Location: 3352284-3353462 bp Feature: domain Description: AAA_13 Location: 3352377-3352551 bp Feature: domain Description: AAA_1 3 Location: 3352377-3352551 bp Feature: domain Description: AAA_13 Location: 3352773-3353346 bp Feature: domain Description: AAA_1 3 Location: 3352773-3353346 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG2958 (Uncharacterized protein ), AAA_15 (pfam13175), RVT-Retrons, COG0610 (Type I site-specific restriction-modification system, R (restriction) subunit and related helicases ), AAA_13 (pfam13166)

Seq: NHZM01000003.1 Klebsiella pneumoniae strain UCI108 scaffold00003, whole genome shotgun sequence (203370 bp)
Overview 1 RT 1: 181591-186385 bp Neighborhood of RT #1 [181591, 186387] umuC PRK10276 RVT-GII Antirestrict Feature: gene Location: 181591-182640 bp Feature: domain Description: umuC Location: 181594-182590 bp Feature: domain Description: umuC Location: 181594-182 590 bp Feature: gene Location: 182640-183065 bp Feature: domain Description: PRK10276 Location: 182643-183051 bp Feature: domain Description: PRK102 76 Location: 182 643-183051 bp Feature: gene Location: 183545-184978 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 183872-184586 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 183872 -184586 bp Feature: gene Location: 185212-185442 bp Feature: gene Location: 185962-186387 bp Feature: domain Description: Antirestrict Location: 186097-186385 bp Feature: domain Description: Antirestrict Location: 186097-186385 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, Antirestrict (pfam03230)